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HIV VIS-Cistrome Factor Overlapped Record Details

This pages show details of Cistrome factor-ralated samples which overlapped this VIS.
The cistrome refers to "the set of cis-acting targets of a trans-acting factor on a genome-wide scale."


Location chr1: 26123511-26123512 (GRCh38)
GSMID or ENCODE Cell line Cell type Tissue type Factor
GSM530665 IMR90 Fibroblast Lung DNase [Search on ENCODE]
GSM665820 None Natural Killer Cell Blood DNase [Search on ENCODE]
GSM1024609 None Epithelium Mammary Gland DNase [Search on ENCODE]
GSM817219 None Epithelium Fetal Placenta DNase [Search on ENCODE]
GSM905351 U87MG Glial Cell Brain DNase [Search on ENCODE]
GSM905353 U87MG Glial Cell Brain DNase [Search on ENCODE]
GSM905352 U87MG Glial Cell Brain DNase [Search on ENCODE]
GSM905354 U87MG Glial Cell Brain DNase [Search on ENCODE]
GSM646564 None Fibroblast Skin DNase [Search on ENCODE]
GSM646565 None Epithelium None DNase [Search on ENCODE]
GSM646561 None Epithelium Mammary Gland DNase [Search on ENCODE]
GSM646570 None Endothelial Cell Blood DNase [Search on ENCODE]
GSM753974 None Epithelium Mammary Gland DNase [Search on ENCODE]
GSM753973 None Epithelium Mammary Gland DNase [Search on ENCODE]
GSM909312 None Fibroblast Foreskin DNase [Search on ENCODE]
GSM931361 WI-38 Fibroblast Lung DNase [Search on ENCODE]
GSM931362 WI-38 Fibroblast Lung DNase [Search on ENCODE]
GSM1027350 None Keratinocyte Foreskin DNase [Search on ENCODE]
GSM1027321 None None Psoas Muscle DNase [Search on ENCODE]
GSM817195 None Keratinocyte Foreskin DNase [Search on ENCODE]
GSM817194 None Keratinocyte Foreskin DNase [Search on ENCODE]
GSM817197 None Keratinocyte Foreskin DNase [Search on ENCODE]
GSM817169 None Fibroblast Foreskin DNase [Search on ENCODE]
GSM817196 None Keratinocyte Foreskin DNase [Search on ENCODE]
GSM817170 None Fibroblast Foreskin DNase [Search on ENCODE]
GSM1014523 None T Lymphocyte Blood DNase [Search on ENCODE]
GSM1014541 None Th17 None DNase [Search on ENCODE]
GSM1014514 None Myoblast Skeletal Muscle DNase [Search on ENCODE]
GSM1014528 None Endothelial Cell Umbilical Vein DNase [Search on ENCODE]
GSM1014529 None Endothelial Cell Blood DNase [Search on ENCODE]
GSM1014518 None Embryonic Fibroblast Heart DNase [Search on ENCODE]
GSM1014532 None Endothelial Cell Blood DNase [Search on ENCODE]
GSM1014535 RPMI-7951 Melanoma Cell Skin DNase [Search on ENCODE]
GSM1014508 HA-sp Astrocyte Spinal Cord DNase [Search on ENCODE]
GSM1014511 None Epithelium Esophagus DNase [Search on ENCODE]
GSM1014519 None Endothelial Cell Blood DNase [Search on ENCODE]
GSM1014524 LHCN-M2 Myoblast Skeletal Muscle DNase [Search on ENCODE]
GSM1014531 None Embryonic Fibroblast Foreskin DNase [Search on ENCODE]
GSM1014520 None Epithelium None DNase [Search on ENCODE]
GSM1014522 None Th2 None DNase [Search on ENCODE]
GSM1014538 M059J Glial Cell Brain DNase [Search on ENCODE]
GSM723024 IMR90 Fibroblast Lung DNase [Search on ENCODE]
GSM774241 None Fibroblast Foreskin DNase [Search on ENCODE]
GSM774240 None Fibroblast Foreskin DNase [Search on ENCODE]
GSM849029 None Fibroblast Umbilical Vein DNase [Search on ENCODE]
GSM849025 None Epithelium Lung DNase [Search on ENCODE]
GSM1102738 None None Psoas Muscle DNase [Search on ENCODE]
GSM1224666 HCT-116 None Colon DNase [Search on ENCODE]
GSM1224667 HCT-116 None Colon DNase [Search on ENCODE]
GSM1224668 HCT-116 None Colon DNase [Search on ENCODE]
GSM1224669 HCT-116 None Colon DNase [Search on ENCODE]
GSM1338307 None Fibroblast None DNase [Search on ENCODE]
GSM1338308 None Fibroblast None DNase [Search on ENCODE]
GSM1338309 None Fibroblast None DNase [Search on ENCODE]
GSM1338310 None Fibroblast None DNase [Search on ENCODE]
GSM736554 None Endothelial Cell Umbilical Vein DNase [Search on ENCODE]
GSM736509 None Endothelial Cell Umbilical Vein DNase [Search on ENCODE]
GSM736494 None Embryonic Fibroblast Heart DNase [Search on ENCODE]
GSM736601 None Embryonic Fibroblast Heart DNase [Search on ENCODE]
GSM736493 HCT-116 None Colon DNase [Search on ENCODE]
GSM736564 HeLa-S3 Epithelium Cervix DNase [Search on ENCODE]
GSM736634 None Epithelium Mammary Gland DNase [Search on ENCODE]
GSM736552 None Epithelium Mammary Gland DNase [Search on ENCODE]
GSM736541 None Epithelium Mammary Gland DNase [Search on ENCODE]
GSM736609 None Endothelial Cell Umbilical Vein DNase [Search on ENCODE]
GSM736521 None Endothelial Cell Umbilical Vein DNase [Search on ENCODE]
GSM736571 None Endothelial Cell Umbilical Vein DNase [Search on ENCODE]
GSM736507 None Endothelial Cell Umbilical Vein DNase [Search on ENCODE]
GSM736621 None Epithelium None DNase [Search on ENCODE]
GSM736630 None Epithelium None DNase [Search on ENCODE]
GSM736623 None Epithelium None DNase [Search on ENCODE]
GSM736575 None Endothelial Cell Umbilical Vein DNase [Search on ENCODE]
GSM736629 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
GSM1024786 LHCN-M2 Myoblast Skeletal Muscle DNase [Search on ENCODE]
GSM1024794 M059J Glial Cell Brain DNase [Search on ENCODE]
GSM736520 NHDF-Ad Fibroblast Skin DNase [Search on ENCODE]
GSM736567 NHDF-Ad Fibroblast Skin DNase [Search on ENCODE]
GSM736519 PANC-1 None Pancreas DNase [Search on ENCODE]
GSM736517 PANC-1 None Pancreas DNase [Search on ENCODE]
GSM1024793 RPMI-7951 Melanoma Cell Skin DNase [Search on ENCODE]
GSM736543 RPTEC Epithelium Kidney DNase [Search on ENCODE]
GSM736608 SAEC Epithelium Lung DNase [Search on ENCODE]
GSM736502 None Th2 Blood DNase [Search on ENCODE]
GSM1024744 None T Lymphocyte Blood DNase [Search on ENCODE]
GSM1024741 None T Lymphocyte Blood DNase [Search on ENCODE]
GSM736526 WI-38 Fibroblast Lung DNase [Search on ENCODE]
GSM1251562 L428 B Lymphocyte Blood DNase [Search on ENCODE]
GSM763533 HeLa Epithelium Cervix DNase [Search on ENCODE]
GSM1645709 None Keratinocyte None ATAC-seq [Search on ENCODE]
GSM1662258 None Fibroblast None ATAC-seq [Search on ENCODE]
GSM1662261 None Fibroblast None ATAC-seq [Search on ENCODE]
GSM1855976 MDA-MB-231 Epithelium Breast ATAC-seq [Search on ENCODE]
GSM1855977 MDA-MB-231 Epithelium Breast ATAC-seq [Search on ENCODE]
GSM1855978 MDA-MB-231 Epithelium Breast ATAC-seq [Search on ENCODE]
GSM1855979 MDA-MB-231 Epithelium Breast ATAC-seq [Search on ENCODE]
GSM1855980 MDA-MB-231 Epithelium Breast ATAC-seq [Search on ENCODE]
GSM1855981 MDA-MB-231 Epithelium Breast ATAC-seq [Search on ENCODE]
GSM1855982 MDA-MB-231 Epithelium Breast ATAC-seq [Search on ENCODE]
GSM1855983 MDA-MB-231 Epithelium Breast ATAC-seq [Search on ENCODE]
GSM1855984 MDA-MB-231 Epithelium Breast ATAC-seq [Search on ENCODE]
GSM1662254 None Epithelium Corneal Epithelium ATAC-seq [Search on ENCODE]
GSM1662255 None Epithelium Corneal Epithelium ATAC-seq [Search on ENCODE]
ENCSR083STA_1 MG-63 Fibroblast Bone DNase [Search on ENCODE]
ENCSR257BGZ_1 ACHN None Kidney DNase [Search on ENCODE]
ENCSR257BGZ_2 ACHN None Kidney DNase [Search on ENCODE]
ENCSR346IHH_1 Daoy Polygonal Cerebellum DNase [Search on ENCODE]
ENCSR346IHH_2 Daoy Polygonal Cerebellum DNase [Search on ENCODE]
ENCSR405TXU_1 None Adipocyte None DNase [Search on ENCODE]
ENCSR515EWI_1 Caki-2 None Kidney DNase [Search on ENCODE]
ENCSR515EWI_2 Caki-2 None Kidney DNase [Search on ENCODE]
ENCSR845CFB_2 None Haematopoietic Progenitor Cell Blood DNase [Search on ENCODE]
ENCSR932KWJ_2 A-172 Glial Cell Brain DNase [Search on ENCODE]
ENCSR940NLN_1 PC-9 Lung Cancer Cell Lung DNase [Search on ENCODE]
ENCSR627GNV_1 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR636VCX_2 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR622RJN_2 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR744QGM_2 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR000FDI_1 HT1080 None Connective Tissue DNase [Search on ENCODE]
ENCSR000FDI_2 HT1080 None Connective Tissue DNase [Search on ENCODE]
ENCSR000FJH_2 NCI-H460 None None DNase [Search on ENCODE]
ENCSR215FCQ_1 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR485CIR_1 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR561XZU_1 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR575VMI_1 None None Placenta DNase [Search on ENCODE]
ENCSR605SNG_1 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR643OAB_1 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR691MQJ_2 EL None None DNase [Search on ENCODE]
ENCSR691MQJ_3 EL None None DNase [Search on ENCODE]
ENCSR785BDQ_1 None glomerular visceral epithelial cell None DNase [Search on ENCODE]
ENCSR818YUC_1 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR873PLF_1 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
GSM1972152 HT1080 None Connective Tissue ATAC-seq [Search on ENCODE]
GSM1972151 HT1080 None Connective Tissue ATAC-seq [Search on ENCODE]
GSM1972150 HT1080 None Connective Tissue ATAC-seq [Search on ENCODE]
GSM1972149 HT1080 None Connective Tissue ATAC-seq [Search on ENCODE]
GSM1972145 HT1080 None Connective Tissue ATAC-seq [Search on ENCODE]
GSM2174880 BJ Fibroblast Skin ATAC-seq [Search on ENCODE]
GSM2174876 BJ Fibroblast Skin ATAC-seq [Search on ENCODE]
GSM2241147 T47D Epithelium Mammary Gland ATAC-seq [Search on ENCODE]
GSM2285637 None T Lymphocyte None ATAC-seq [Search on ENCODE]
GSM2083773 None Macrophage None ATAC-seq [Search on ENCODE]
GSM2579644 HCT-116 None Colon ATAC-seq [Search on ENCODE]
GSM2242135 MDA-MB-231 Epithelium Breast DNase [Search on ENCODE]
GSM2242136 MDA-MB-231 Epithelium Breast DNase [Search on ENCODE]
GSM1876024 None Smooth Muscle Cell Coronary artery smooth muscle ATAC-seq [Search on ENCODE]
GSM1876026 None Smooth Muscle Cell Coronary artery smooth muscle ATAC-seq [Search on ENCODE]
GSM1876028 None Smooth Muscle Cell Coronary artery smooth muscle ATAC-seq [Search on ENCODE]
GSM1946434 hFOB Embryonic Stem Cell Bone DNase [Search on ENCODE]
GSM1858669 ZR-75-1 Embryonic Stem Cell Breast DNase [Search on ENCODE]
GSM2411167 Jurkat T Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM2692559 PC-9 Lung Cancer Cell Lung ATAC-seq [Search on ENCODE]
GSM2401442 BJ Fibroblast Skin ATAC-seq [Search on ENCODE]
GSM816654 None Osteoblast Bone DNase [Search on ENCODE]
GSM2401443 BJ Fibroblast Skin ATAC-seq [Search on ENCODE]
GSM2977487 BJ Fibroblast Skin ATAC-seq [Search on ENCODE]
GSM2676284 MCF-10A Epithelium Breast DNase [Search on ENCODE]
GSM2676285 MCF-10A Epithelium Breast DNase [Search on ENCODE]
GSM2714245 MCF-7 Epithelium Breast ATAC-seq [Search on ENCODE]
GSM2714244 MCF-7 Epithelium Breast ATAC-seq [Search on ENCODE]
GSM2692560 PC-9 Lung Cancer Cell Lung ATAC-seq [Search on ENCODE]
GSM2430672 BJ Fibroblast Skin ATAC-seq [Search on ENCODE]
Contents
Description
  • Overlapped Record Details
An overlapped record means a match between VIS and 1 of 3 Cistrome factor (histone modification, transcription factor binding site and chromatin accessibility), more specifically, this match includes at least 1 overlap between this VIS and 1 Cistrome factor-related sample from 1 of 3 Cistrome factor data. So one VIS may have several overlaps with multiple Cistrome factor-related samples, the associated factor and overlap amount of samples could indicate that the virus integration site is a potentially functional DNA element.