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HIV VIS-Cistrome Factor Overlapped Record Details

This pages show details of Cistrome factor-ralated samples which overlapped this VIS.
The cistrome refers to "the set of cis-acting targets of a trans-acting factor on a genome-wide scale."


Location chr1: 8630024-8630025 (GRCh38)
GSMID or ENCODE Cell line Cell type Tissue type Factor
GSM701541 None Monocyte Blood DNase [Search on ENCODE]
GSM701537 None T Lymphocyte Fetal Thymus DNase [Search on ENCODE]
GSM701526 None T Lymphocyte Cord blood DNase [Search on ENCODE]
GSM701509 None Lymphocyte Spleen DNase [Search on ENCODE]
GSM701507 None B Lymphocyte Spleen DNase [Search on ENCODE]
GSM701503 None Monocyte Blood DNase [Search on ENCODE]
GSM701493 None B Lymphocyte Spleen DNase [Search on ENCODE]
GSM701492 None B Lymphocyte Spleen DNase [Search on ENCODE]
GSM665840 None Monocyte Blood DNase [Search on ENCODE]
GSM665836 None Natural Killer Cell Blood DNase [Search on ENCODE]
GSM665798 None Haematopoietic Progenitor Cell Blood DNase [Search on ENCODE]
GSM595919 None Haematopoietic Progenitor Cell Blood DNase [Search on ENCODE]
GSM595917 None Haematopoietic Progenitor Cell Blood DNase [Search on ENCODE]
GSM595914 None Haematopoietic Progenitor Cell Blood DNase [Search on ENCODE]
GSM530664 None Haematopoietic Progenitor Cell Blood DNase [Search on ENCODE]
GSM530663 None Haematopoietic Progenitor Cell Blood DNase [Search on ENCODE]
GSM530660 None Haematopoietic Progenitor Cell Blood DNase [Search on ENCODE]
GSM530659 None Haematopoietic Progenitor Cell Blood DNase [Search on ENCODE]
GSM530658 None Haematopoietic Progenitor Cell Blood DNase [Search on ENCODE]
GSM530657 None Haematopoietic Progenitor Cell Blood DNase [Search on ENCODE]
GSM530652 None Haematopoietic Progenitor Cell Blood DNase [Search on ENCODE]
GSM493387 None Haematopoietic Progenitor Cell Blood DNase [Search on ENCODE]
GSM493384 None Haematopoietic Progenitor Cell Blood DNase [Search on ENCODE]
GSM778727 GM19222 Lymphoblastoid None DNase [Search on ENCODE]
GSM778726 GM19210 Lymphoblastoid None DNase [Search on ENCODE]
GSM1059530 None T Lymphocyte Blood DNase [Search on ENCODE]
GSM1059529 None None Cord blood DNase [Search on ENCODE]
GSM778678 GM18522 Lymphoblastoid Blood DNase [Search on ENCODE]
GSM646568 GM06990 B Lymphocyte Blood DNase [Search on ENCODE]
GSM646569 None Th1 None DNase [Search on ENCODE]
GSM736513 None Monocyte Blood DNase [Search on ENCODE]
GSM1102737 None T Lymphocyte Cord blood DNase [Search on ENCODE]
GSM1102736 None Monocyte Blood DNase [Search on ENCODE]
GSM878656 None None Fetal Thymus DNase [Search on ENCODE]
GSM816657 GM12892 Lymphoblastoid Blood DNase [Search on ENCODE]
GSM816665 GM12878 B Lymphocyte Blood DNase [Search on ENCODE]
GSM816658 GM19238 Lymphoblastoid Blood DNase [Search on ENCODE]
GSM816648 GM19240 Lymphoblastoid Blood DNase [Search on ENCODE]
GSM1027313 None None Fetal Thymus DNase [Search on ENCODE]
GSM1014523 None T Lymphocyte Blood DNase [Search on ENCODE]
GSM1014526 GM12865 B Lymphocyte Blood DNase [Search on ENCODE]
GSM1014525 None B Lymphocyte Blood DNase [Search on ENCODE]
GSM1014522 None Th2 None DNase [Search on ENCODE]
GSM1014521 None Th2 None DNase [Search on ENCODE]
GSM1014513 NB4 Promyelocytic cell Blood DNase [Search on ENCODE]
GSM1014540 None Th1 None DNase [Search on ENCODE]
GSM723023 None Epithelium Fetal Heart DNase [Search on ENCODE]
GSM723022 None Haematopoietic Progenitor Cell Cord blood DNase [Search on ENCODE]
GSM774208 None Haematopoietic Progenitor Cell Blood DNase [Search on ENCODE]
GSM1220604 None B Lymphocyte Spleen DNase [Search on ENCODE]
GSM1024765 None B Lymphocyte Blood DNase [Search on ENCODE]
GSM1024766 None B Lymphocyte Blood DNase [Search on ENCODE]
GSM1024770 None Haematopoietic Progenitor Cell Blood DNase [Search on ENCODE]
GSM736561 GM12865 B Lymphocyte Blood DNase [Search on ENCODE]
GSM736620 GM12878 B Lymphocyte Blood DNase [Search on ENCODE]
GSM1024791 None Monocyte Blood DNase [Search on ENCODE]
GSM736604 NB4 Promyelocytic cell Blood DNase [Search on ENCODE]
GSM736529 NB4 Promyelocytic cell Blood DNase [Search on ENCODE]
GSM1024760 None Th1 Blood DNase [Search on ENCODE]
GSM1024752 None Th1 Blood DNase [Search on ENCODE]
GSM1024744 None T Lymphocyte Blood DNase [Search on ENCODE]
GSM1406338 None Macrophage Blood DNase [Search on ENCODE]
GSM1406342 None Macrophage Blood DNase [Search on ENCODE]
GSM1406344 None Macrophage Blood DNase [Search on ENCODE]
GSM1406347 None Macrophage Blood DNase [Search on ENCODE]
GSM1406357 None Macrophage Blood DNase [Search on ENCODE]
GSM1581820 None Stem cell Blood DNase [Search on ENCODE]
GSM1581821 None Myeloid Cell None DNase [Search on ENCODE]
GSM1581822 None Myeloid Cell None DNase [Search on ENCODE]
GSM1581823 None Myeloid Cell None DNase [Search on ENCODE]
GSM1581824 None Myeloid Cell None DNase [Search on ENCODE]
GSM1581825 None Myeloid Cell None DNase [Search on ENCODE]
GSM1581826 None Myeloid Cell None DNase [Search on ENCODE]
GSM1581829 None Myeloid Cell None DNase [Search on ENCODE]
GSM1581830 None Myeloid Cell None DNase [Search on ENCODE]
GSM1581831 None Myeloid Cell None DNase [Search on ENCODE]
GSM1581833 None Myeloid Cell None DNase [Search on ENCODE]
GSM1565734 None Dendritic Cell None ATAC-seq [Search on ENCODE]
GSM1565735 None Dendritic Cell None ATAC-seq [Search on ENCODE]
GSM1854467 GM12878 B Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM1854468 GM12878 B Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM2113548 MM1.S B Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM1832752 None B Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM1832753 None B Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM1832754 None B Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM1832755 None B Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM1832756 None B Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM1832757 None B Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM1832758 None B Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM1832759 None B Lymphocyte Blood ATAC-seq [Search on ENCODE]
ENCSR148VUP_1 None Haematopoietic Progenitor Cell Blood DNase [Search on ENCODE]
ENCSR148VUP_2 None Haematopoietic Progenitor Cell Blood DNase [Search on ENCODE]
ENCSR426IEA_2 KBM-7 Myeloblast Blood DNase [Search on ENCODE]
ENCSR595CSH None None Brain DNase [Search on ENCODE]
ENCSR564JUY_1 None Haematopoietic Progenitor Cell Blood DNase [Search on ENCODE]
ENCSR705CNJ_2 None None Heart DNase [Search on ENCODE]
ENCSR373BIX_2 None Dendritic Cell None DNase [Search on ENCODE]
ENCSR584LUZ_1 None None Ammon's horn DNase [Search on ENCODE]
ENCSR829MXU_2 None None Pons DNase [Search on ENCODE]
GSM2325688 None Monocyte Blood ATAC-seq [Search on ENCODE]
GSM2325687 None Monocyte Blood ATAC-seq [Search on ENCODE]
GSM2325683 None Monocyte Blood ATAC-seq [Search on ENCODE]
GSM2243040 None Dendritic Cell None ATAC-seq [Search on ENCODE]
GSM2243039 None Plasmacytoid dendritic cell None ATAC-seq [Search on ENCODE]
GSM2243038 None Dendritic Cell None ATAC-seq [Search on ENCODE]
GSM2243037 None Plasmacytoid dendritic cell None ATAC-seq [Search on ENCODE]
GSM2243036 MOLM-14 acute myeloid leukemia (AML) cell line None ATAC-seq [Search on ENCODE]
GSM2243035 HL-60 Promyeloblast Blood ATAC-seq [Search on ENCODE]
GSM2243034 Gen2.2 Plasmacytoid dendritic cell None ATAC-seq [Search on ENCODE]
GSM2243033 CAL-1 Plasmacytoid dendritic cell None ATAC-seq [Search on ENCODE]
GSM2544231 THP-1 Macrophage None ATAC-seq [Search on ENCODE]
GSM2544219 THP-1 Macrophage None ATAC-seq [Search on ENCODE]
GSM2544218 THP-1 Macrophage None ATAC-seq [Search on ENCODE]
GSM2359981 None Macrophage None ATAC-seq [Search on ENCODE]
GSM2083829 None Monocyte None ATAC-seq [Search on ENCODE]
GSM2083826 None Monocyte None ATAC-seq [Search on ENCODE]
GSM2083782 None Macrophage None ATAC-seq [Search on ENCODE]
GSM2083780 None Macrophage None ATAC-seq [Search on ENCODE]
GSM2083773 None Macrophage None ATAC-seq [Search on ENCODE]
GSM2083766 None Macrophage None ATAC-seq [Search on ENCODE]
GSM489282 GM12892 Lymphoblastoid Blood DNase [Search on ENCODE]
GSM489285 GM19240 Lymphoblastoid Blood DNase [Search on ENCODE]
GSM489287 GM19238 Lymphoblastoid Blood DNase [Search on ENCODE]
GSM2898852 LCL Lymphoblastoid Blood ATAC-seq [Search on ENCODE]
GSM2679898 None Monocyte Blood ATAC-seq [Search on ENCODE]
GSM2679899 None Monocyte Blood ATAC-seq [Search on ENCODE]
GSM2679878 None Monocyte Blood ATAC-seq [Search on ENCODE]
GSM2679879 None Monocyte Blood ATAC-seq [Search on ENCODE]
GSM2679877 None Monocyte Blood ATAC-seq [Search on ENCODE]
GSM2679875 None Monocyte Blood ATAC-seq [Search on ENCODE]
GSM2679870 None Monocyte Blood ATAC-seq [Search on ENCODE]
GSM2679871 None Monocyte Blood ATAC-seq [Search on ENCODE]
GSM2679897 None Monocyte Blood ATAC-seq [Search on ENCODE]
GSM2679890 None Monocyte Blood ATAC-seq [Search on ENCODE]
GSM2679892 None Monocyte Blood ATAC-seq [Search on ENCODE]
GSM2679893 None Monocyte Blood ATAC-seq [Search on ENCODE]
GSM2679882 None Monocyte Blood ATAC-seq [Search on ENCODE]
GSM2679880 None Monocyte Blood ATAC-seq [Search on ENCODE]
GSM2679887 None Monocyte Blood ATAC-seq [Search on ENCODE]
GSM2679883 None Monocyte Blood ATAC-seq [Search on ENCODE]
GSM2679885 None Monocyte Blood ATAC-seq [Search on ENCODE]
GSM2679902 None Monocyte Blood ATAC-seq [Search on ENCODE]
GSM2679901 None Monocyte Blood ATAC-seq [Search on ENCODE]
GSM2679904 None Monocyte Blood ATAC-seq [Search on ENCODE]
GSM2326844 None t(3;21) paitent None DNase [Search on ENCODE]
GSM2326845 None Plasmablast None DNase [Search on ENCODE]
GSM2326843 None AML cell None DNase [Search on ENCODE]
GSM2679867 None Monocyte Blood ATAC-seq [Search on ENCODE]
GSM2371313 None Hematopoietic Cell None ATAC-seq [Search on ENCODE]
GSM2898867 LCL Lymphoblastoid Blood ATAC-seq [Search on ENCODE]
GSM2898863 LCL Lymphoblastoid Blood ATAC-seq [Search on ENCODE]
GSM2592782 None Macrophage Blood ATAC-seq [Search on ENCODE]
GSM2592783 None Macrophage Blood ATAC-seq [Search on ENCODE]
GSM2592781 None Macrophage Blood ATAC-seq [Search on ENCODE]
GSM2702716 None B Lymphocyte None ATAC-seq [Search on ENCODE]
GSM2679894 None Monocyte Blood ATAC-seq [Search on ENCODE]
GSM2679895 None Monocyte Blood ATAC-seq [Search on ENCODE]
GSM2679896 None Monocyte Blood ATAC-seq [Search on ENCODE]
Contents
Description
  • Overlapped Record Details
An overlapped record means a match between VIS and 1 of 3 Cistrome factor (histone modification, transcription factor binding site and chromatin accessibility), more specifically, this match includes at least 1 overlap between this VIS and 1 Cistrome factor-related sample from 1 of 3 Cistrome factor data. So one VIS may have several overlaps with multiple Cistrome factor-related samples, the associated factor and overlap amount of samples could indicate that the virus integration site is a potentially functional DNA element.