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HIV VIS-Cistrome Factor Overlapped Record Details

This pages show details of Cistrome factor-ralated samples which overlapped this VIS.
The cistrome refers to "the set of cis-acting targets of a trans-acting factor on a genome-wide scale."


Location chr1: 89299862-89299863 (GRCh38)
GSMID or ENCODE Cell line Cell type Tissue type Factor
GSM776557 None Th1 None TBX21 [Search on ENCODE]
GSM822277 GM19239 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM486282 GM19099 Lymphoblastoid Blood RELA [Search on ENCODE]
GSM486290 GM15510 Lymphoblastoid Blood RELA [Search on ENCODE]
GSM1195560 None B Lymphocyte Blood IRF4 [Search on ENCODE]
GSM1057013 None Monocyte Blood STAT1 [Search on ENCODE]
GSM1057025 None Monocyte Blood IRF1 [Search on ENCODE]
GSM1164246 GM18516 Lymphoblastoid Blood POLR2A [Search on ENCODE]
GSM1233887 GM12878 B Lymphocyte Blood CTCF [Search on ENCODE]
GSM1233888 GM12878 B Lymphocyte Blood CTCF [Search on ENCODE]
GSM1233914 GM12890 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1233915 GM12890 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1233916 GM12890 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1233931 GM12890 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1233932 GM12890 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1233933 GM12891 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1233934 GM12891 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1233955 GM12892 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1233956 GM12892 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1233975 GM12892 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1233977 GM18486 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1233979 GM18486 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1233991 GM18486 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1233992 GM18486 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1233994 GM18505 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234010 GM18526 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234011 GM18526 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234026 GM18526 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1234044 GM19099 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234078 GM19238 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234079 GM19238 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234097 GM19238 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1234098 GM19238 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1234099 GM19239 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234100 GM19239 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234119 GM19239 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1234120 GM19239 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1234121 GM19240 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234122 GM19240 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234142 GM19240 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1234144 GM2255 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234145 GM2255 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234146 GM2255 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234160 GM2255 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1234161 GM2255 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1234162 GM2588 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234163 GM2588 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234164 GM2588 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234178 GM2588 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1234179 GM2588 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1234180 GM2610 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234181 GM2610 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234196 GM2610 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1234197 GM2610 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1234198 GM2630 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234199 GM2630 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234214 GM2630 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1234215 GM2630 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1234217 MS1 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234218 MS1 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1234237 MS1 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1273052 None B Lymphocyte None EBNA3C [Search on ENCODE]
GSM1273053 None B Lymphocyte None EBNA3C [Search on ENCODE]
GSM417829 None T Lymphocyte Blood POLR2A [Search on ENCODE]
GSM1003617 GM12878 B Lymphocyte Blood SREBF1 [Search on ENCODE]
GSM935430 GM12878 B Lymphocyte Blood BHLHE40 [Search on ENCODE]
GSM935478 GM12878 B Lymphocyte Blood RELA [Search on ENCODE]
GSM935562 GM12878 B Lymphocyte Blood EP300 [Search on ENCODE]
GSM935526 GM12891 Lymphoblastoid Blood RELA [Search on ENCODE]
GSM935529 GM15510 Lymphoblastoid Blood RELA [Search on ENCODE]
GSM935531 GM18951 Lymphoblastoid Blood RELA [Search on ENCODE]
GSM935273 GM19099 Lymphoblastoid Blood RELA [Search on ENCODE]
GSM935323 GM19099 Lymphoblastoid Blood POLR2A [Search on ENCODE]
GSM935279 GM19193 Lymphoblastoid Blood RELA [Search on ENCODE]
GSM671402 None Lymphocyte Blood STAT5B [Search on ENCODE]
GSM803538 GM12878 B Lymphocyte Blood BATF [Search on ENCODE]
GSM1010779 GM12878 B Lymphocyte Blood NFATC1 [Search on ENCODE]
GSM1010881 GM12878 B Lymphocyte Blood NFIC [Search on ENCODE]
GSM1010780 GM12878 B Lymphocyte Blood ATF2 [Search on ENCODE]
GSM803511 GM12878 B Lymphocyte Blood MEF2A [Search on ENCODE]
GSM803390 GM12878 B Lymphocyte Blood IRF4 [Search on ENCODE]
GSM1010893 GM12878 B Lymphocyte Blood RUNX3 [Search on ENCODE]
GSM1010731 GM12878 B Lymphocyte Blood FOXM1 [Search on ENCODE]
GSM1010760 GM12878 B Lymphocyte Blood CREB1 [Search on ENCODE]
GSM803338 GM12878 B Lymphocyte Blood SIX5 [Search on ENCODE]
GSM1010771 GM12878 B Lymphocyte Blood PML [Search on ENCODE]
GSM803420 GM12878 B Lymphocyte Blood MEF2C [Search on ENCODE]
GSM1010729 GM12878 B Lymphocyte Blood MTA3 [Search on ENCODE]
GSM803416 GM12878 B Lymphocyte Blood RAD21 [Search on ENCODE]
GSM803388 GM12878 B Lymphocyte Blood BCL11A [Search on ENCODE]
GSM1164147 DU145 Epithelium Prostate FOXA1 [Search on ENCODE]
GSM1333964 GM12878 B Lymphocyte Blood EP300 [Search on ENCODE]
GSM486308 GM18951 Lymphoblastoid Blood RELA [Search on ENCODE]
GSM486318 GM12878 B Lymphocyte Blood RELA [Search on ENCODE]
GSM486323 GM12891 Lymphoblastoid Blood RELA [Search on ENCODE]
GSM486324 GM12891 Lymphoblastoid Blood RELA [Search on ENCODE]
GSM486462 GM19099 Lymphoblastoid Blood POLR2A [Search on ENCODE]
GSM486463 GM19099 Lymphoblastoid Blood POLR2A [Search on ENCODE]
GSM489300 GM19238 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM489301 GM19239 Lymphoblastoid Blood CTCF [Search on ENCODE]
GSM1577746 None T Lymphocyte Blood STAT5B [Search on ENCODE]
GSM1577747 None T Lymphocyte Blood STAT5B [Search on ENCODE]
GSM1577751 None T Lymphocyte Blood STAT5B [Search on ENCODE]
GSM1690058 OCI-Ly10 B Lymphocyte Bone Marrow FOXP1 [Search on ENCODE]
GSM558637 GM10861 Lymphocyte Blood VDR [Search on ENCODE]
GSM558636 GM10861 Lymphocyte Blood VDR [Search on ENCODE]
GSM1859069 None Th1 None MYB [Search on ENCODE]
GSM1859073 None Th2 None MAF [Search on ENCODE]
GSM1958041 LCL Lymphoblastoid Blood RBPJ [Search on ENCODE]
ENCSR189YYK_2 GM12878 B Lymphocyte Blood ZBTB40 [Search on ENCODE]
ENCSR230ZWH_2 None None Liver RAD21 [Search on ENCODE]
ENCSR293QAR_1 GM12878 B Lymphocyte Blood MTA2 [Search on ENCODE]
ENCSR293QAR_2 GM12878 B Lymphocyte Blood MTA2 [Search on ENCODE]
ENCSR412QBS_2 GM12878 B Lymphocyte Blood TARDBP [Search on ENCODE]
ENCSR739IHN_2 GM12878 B Lymphocyte Blood TBX21 [Search on ENCODE]
ENCSR874AFU_2 GM12878 B Lymphocyte Blood IKZF1 [Search on ENCODE]
ENCSR897MMC_1 GM12878 B Lymphocyte Blood JUNB [Search on ENCODE]
ENCSR897MMC_2 GM12878 B Lymphocyte Blood JUNB [Search on ENCODE]
ENCSR917QNE_1 None None Liver RAD21 [Search on ENCODE]
GSM1919987 CFPAC-1 None Pancreatic ductal FOXA1 [Search on ENCODE]
GSM1919986 CFPAC-1 None Pancreatic ductal ELF3 [Search on ENCODE]
GSM1574274 CFPAC-1 None Pancreatic ductal FOXA1 [Search on ENCODE]
GSM1574273 CFPAC-1 None Pancreatic ductal ELF3 [Search on ENCODE]
GSM803509 GM12878 B Lymphocyte Blood BCLAF1 [Search on ENCODE]
GSM2302869 MM1.S B Lymphocyte Blood HDAC1 [Search on ENCODE]
GSM1527698 None Th2 None POLR2A [Search on ENCODE]
GSM1527696 None Th1 None POLR2A [Search on ENCODE]
GSM2176976 None Th1 None T [Search on ENCODE]
GSM2628093 GM12878 Lymphoblastoid None REL [Search on ENCODE]
GSM1982474 None Epithelium Epididymis HNF1A [Search on ENCODE]
GSM2519942 None None Muscle NR3C1 [Search on ENCODE]
GSM2519945 None None Muscle NR3C1 [Search on ENCODE]
GSM2519944 None None Muscle NR3C1 [Search on ENCODE]
GSM2519947 None None Muscle NR3C1 [Search on ENCODE]
GSM2519949 None None Muscle NR3C1 [Search on ENCODE]
GSM2519948 None None Muscle NR3C1 [Search on ENCODE]
GSM2401447 BJ Fibroblast Skin FOXA2 [Search on ENCODE]
GSM2592808 None Macrophage Blood SPI1 [Search on ENCODE]
GSM2401467 BJ Fibroblast Skin FOXA2 [Search on ENCODE]
GSM2401469 BJ Fibroblast Skin FOXA2 [Search on ENCODE]
GSM2443453 LCL B Lymphocyte None NIPBL [Search on ENCODE]
GSM2443458 LCL B Lymphocyte None MED1 [Search on ENCODE]
GSM2040770 ID00016 Lymphoblastoid None CTCF [Search on ENCODE]
GSM2643541 LCL Lymphoblastoid Blood BRD4 [Search on ENCODE]
GSM2643540 LCL Lymphoblastoid Blood BRD4 [Search on ENCODE]
GSM2519950 None None Muscle KLF15 [Search on ENCODE]
GSM2519951 None None Muscle KLF15 [Search on ENCODE]
GSM2430675 BJ Fibroblast Skin FOXA2 [Search on ENCODE]
GSM2643539 LCL Lymphoblastoid Blood BRD4 [Search on ENCODE]
Contents
Description
  • Overlapped Record Details
An overlapped record means a match between VIS and 1 of 3 Cistrome factor (histone modification, transcription factor binding site and chromatin accessibility), more specifically, this match includes at least 1 overlap between this VIS and 1 Cistrome factor-related sample from 1 of 3 Cistrome factor data. So one VIS may have several overlaps with multiple Cistrome factor-related samples, the associated factor and overlap amount of samples could indicate that the virus integration site is a potentially functional DNA element.