Home
Virus
Gene
Disease
Dataset
Download
Help
 
HIV VIS-Cistrome Factor Overlapped Record Details

This pages show details of Cistrome factor-ralated samples which overlapped this VIS.
The cistrome refers to "the set of cis-acting targets of a trans-acting factor on a genome-wide scale."


Location chr1: 32789398-32789399 (GRCh38)
GSMID or ENCODE Cell line Cell type Tissue type Factor
GSM566163 HeLa Epithelium Cervix C17orf49 [Search on ENCODE]
GSM730704 None Endothelial Cell Umbilical Vein FOS [Search on ENCODE]
GSM525269 T98G None Brain CREBBP [Search on ENCODE]
GSM838675 None Glioblastoma Multiforme Stem Like None ATF3 [Search on ENCODE]
GSM894077 U87 None Brain MAX [Search on ENCODE]
GSM894082 U87 None Brain MED1 [Search on ENCODE]
GSM935551 MCF-10A Epithelium Breast STAT3 [Search on ENCODE]
GSM1095931 None Epithelium Cervix FAIRE [Search on ENCODE]
GSM1122847 None Epithelium Mammary Gland FAIRE [Search on ENCODE]
GSM1122848 None Epithelium Mammary Gland FAIRE [Search on ENCODE]
GSM1208763 LoVo None Colon JUND [Search on ENCODE]
GSM1038284 U87 None Brain BRD4 [Search on ENCODE]
GSM934617 LX2 Hepatic Stellate Cell None VDR [Search on ENCODE]
GSM1195554 U87 None Brain POLR2A [Search on ENCODE]
GSM1195552 U87 None Brain BRD4 [Search on ENCODE]
GSM1195551 U87 None Brain BRD4 [Search on ENCODE]
GSM1257396 None Stromal Cell None NR2F2 [Search on ENCODE]
GSM1264165 HeLa Epithelium Cervix CHRM2 [Search on ENCODE]
GSM1295092 None Fibroblast Foreskin RNF2 [Search on ENCODE]
GSM534493 None Stromal Cell Adipose PPARG [Search on ENCODE]
GSM935630 A549 Epithelium Lung CEBPB [Search on ENCODE]
GSM935500 HeLa-S3 Epithelium Cervix EP300 [Search on ENCODE]
GSM935560 HeLa-S3 Epithelium Cervix RFX5 [Search on ENCODE]
GSM935561 HeLa-S3 Epithelium Cervix USF2 [Search on ENCODE]
GSM935328 HeLa-S3 Epithelium Cervix JUND [Search on ENCODE]
GSM935341 HeLa-S3 Epithelium Cervix JUN [Search on ENCODE]
GSM935571 HeLa-S3 Epithelium Cervix RAD21 [Search on ENCODE]
GSM935384 HeLa-S3 Epithelium Cervix SMC3 [Search on ENCODE]
GSM935553 HeLa-S3 Epithelium Cervix CEBPB [Search on ENCODE]
GSM1003618 HeLa-S3 Epithelium Cervix HCFC1 [Search on ENCODE]
GSM935276 HeLa-S3 Epithelium Cervix STAT3 [Search on ENCODE]
GSM935405 HeLa-S3 Epithelium Cervix MAX [Search on ENCODE]
GSM935606 HeLa-S3 Epithelium Cervix TBP [Search on ENCODE]
GSM935278 None Endothelial Cell Umbilical Vein JUN [Search on ENCODE]
GSM935585 None Endothelial Cell Umbilical Vein FOS [Search on ENCODE]
GSM935519 IMR90 Fibroblast Lung CEBPB [Search on ENCODE]
GSM935457 MCF-10A Epithelium Breast STAT3 [Search on ENCODE]
GSM935398 MCF-10A Epithelium Breast FOS [Search on ENCODE]
GSM935400 MCF-10A Epithelium Breast E2F4 [Search on ENCODE]
GSM935491 MCF-10A Epithelium Breast MYC [Search on ENCODE]
GSM935399 MCF-10A Epithelium Breast STAT3 [Search on ENCODE]
GSM935588 MCF-10A Epithelium Breast POLR2A [Search on ENCODE]
GSM935396 MCF-10A Epithelium Breast FOS [Search on ENCODE]
GSM935397 MCF-10A Epithelium Breast FOS [Search on ENCODE]
GSM935438 MCF-10A Epithelium Breast FOS [Search on ENCODE]
GSM935441 MCF-10A Epithelium Breast MYC [Search on ENCODE]
GSM1010813 A549 Epithelium Lung SP1 [Search on ENCODE]
GSM1010748 A549 Epithelium Lung FOSL2 [Search on ENCODE]
GSM1010802 ECC-1 Epithelium Endometrium CEBPB [Search on ENCODE]
GSM1010762 ECC-1 Epithelium Endometrium SRF [Search on ENCODE]
GSM1010856 ECC-1 Epithelium Endometrium FOXM1 [Search on ENCODE]
GSM1010807 ECC-1 Epithelium Endometrium MAX [Search on ENCODE]
GSM1010759 ECC-1 Epithelium Endometrium EP300 [Search on ENCODE]
GSM1010886 ECC-1 Epithelium Endometrium USF1 [Search on ENCODE]
GSM1010855 ECC-1 Epithelium Endometrium NFIC [Search on ENCODE]
GSM1010885 ECC-1 Epithelium Endometrium TEAD4 [Search on ENCODE]
GSM1010836 HCT-116 None Colon USF1 [Search on ENCODE]
GSM1010852 HCT-116 None Colon CEBPB [Search on ENCODE]
GSM1010848 HCT-116 None Colon RAD21 [Search on ENCODE]
GSM1010758 HCT-116 None Colon CBX3 [Search on ENCODE]
GSM1010851 HCT-116 None Colon SRF [Search on ENCODE]
GSM1010756 HCT-116 None Colon FOSL1 [Search on ENCODE]
GSM1010847 HCT-116 None Colon JUND [Search on ENCODE]
GSM1010902 HCT-116 None Colon SP1 [Search on ENCODE]
GSM1010904 HCT-116 None Colon MAX [Search on ENCODE]
GSM1010839 MCF-7 Epithelium Breast SRF [Search on ENCODE]
GSM1010880 SK-N-SH Neuroblastoma cell Brain NFIC [Search on ENCODE]
GSM1010840 SK-N-SH Neuroblastoma cell Brain FOSL2 [Search on ENCODE]
GSM1010763 SK-N-SH Neuroblastoma cell Brain EP300 [Search on ENCODE]
GSM1010738 SK-N-SH Neuroblastoma cell Brain GATA3 [Search on ENCODE]
GSM1010900 SK-N-SH Neuroblastoma cell Brain TCF12 [Search on ENCODE]
GSM803459 U87 None Brain POLR2A [Search on ENCODE]
GSM1125261 BT-549 Epithelium Mammary Gland FOSL1 [Search on ENCODE]
GSM1125262 BT-549 Epithelium Mammary Gland JUN [Search on ENCODE]
GSM1246714 NCI-H441 Epithelium Lung SMAD3 [Search on ENCODE]
GSM1305212 None Endothelial Cell Umbilical Vein RELA [Search on ENCODE]
GSM1340091 None Fibroblast None PCGF2 [Search on ENCODE]
GSM1463930 None Myoblast None MED1 [Search on ENCODE]
GSM1443809 hMADS-3 Adipocyte Adipose PPARG [Search on ENCODE]
GSM1443810 hMADS-3 Adipocyte Adipose PPARG [Search on ENCODE]
GSM1537679 hMADS-3 Adipocyte Adipose MED1 [Search on ENCODE]
GSM1537680 hMADS-3 Adipocyte Adipose MED1 [Search on ENCODE]
GSM1567049 6540 cells Epithelium None LHX2 [Search on ENCODE]
GSM1503219 None None Coronary artery smooth muscle JUN [Search on ENCODE]
GSM1503220 None None Coronary artery smooth muscle JUND [Search on ENCODE]
GSM1566728 None Adipocyte None MED1 [Search on ENCODE]
GSM1647185 HEK293A None None MEF2B [Search on ENCODE]
GSM1678029 PC-3 Epithelium Prostate DAXX [Search on ENCODE]
GSM1678030 PC-3 Epithelium Prostate DAXX [Search on ENCODE]
GSM1684634 None Mesenchymal Stem Cell None CEBPB [Search on ENCODE]
GSM1684635 None Mesenchymal Stem Cell None CEBPB [Search on ENCODE]
GSM1684636 None Mesenchymal Stem Cell None CEBPB [Search on ENCODE]
GSM1684643 None Mesenchymal Stem Cell None CEBPB [Search on ENCODE]
GSM791406 LS180 Epithelium Colon RXRA [Search on ENCODE]
GSM791412 LS180 Epithelium Colon CEBPB [Search on ENCODE]
GSM1542532 NCI-H2052 Epithelium Lung YAP1 [Search on ENCODE]
GSM1542533 NCI-H2052 Epithelium Lung YAP1 [Search on ENCODE]
GSM1614036 MDA-MB-231 Epithelium Breast JUN [Search on ENCODE]
GSM1614037 MDA-MB-231 Epithelium Breast JUN [Search on ENCODE]
GSM1642769 786-O Epithelium Kidney SPI1 [Search on ENCODE]
GSM1517093 HeLa Epithelium Cervix EP300 [Search on ENCODE]
GSM1517095 HeLa Epithelium Cervix EP300 [Search on ENCODE]
GSM1517096 HeLa Epithelium Cervix EP300 [Search on ENCODE]
GSM1700785 MDA-MB-231 Epithelium Breast JUN [Search on ENCODE]
GSM1700786 MDA-MB-231 Epithelium Breast JUN [Search on ENCODE]
GSM1716769 LHSAR Epithelium Prostate AR [Search on ENCODE]
GSM1893926 MOLM-14 Myeloid Cell None CDK8 [Search on ENCODE]
GSM1893928 MOLM-14 Myeloid Cell None CDK8 [Search on ENCODE]
GSM1974448 MDA-MB-231 Epithelium Breast MBD3 [Search on ENCODE]
ENCSR067XTW_3 A549 Epithelium Lung FOSL2 [Search on ENCODE]
ENCSR106EBH_1 HEK293 Epithelium Embryonic Kidney ZNF366 [Search on ENCODE]
ENCSR106EBH_2 HEK293 Epithelium Embryonic Kidney ZNF366 [Search on ENCODE]
ENCSR111ZXV_3 A549 Epithelium Lung FOSL2 [Search on ENCODE]
ENCSR190VMK_2 A549 Epithelium Lung CEBPB [Search on ENCODE]
ENCSR239ZLZ_1 K562 Erythroblast Bone Marrow FOSL1 [Search on ENCODE]
ENCSR239ZLZ_2 K562 Erythroblast Bone Marrow FOSL1 [Search on ENCODE]
ENCSR242EWU_2 A549 Epithelium Lung FOSL2 [Search on ENCODE]
ENCSR242EWU_3 A549 Epithelium Lung FOSL2 [Search on ENCODE]
ENCSR375BUB_2 A549 Epithelium Lung CEBPB [Search on ENCODE]
ENCSR468IJT_2 HEK293 Epithelium Embryonic Kidney SP7 [Search on ENCODE]
ENCSR474DCX_1 A549 Epithelium Lung CEBPB [Search on ENCODE]
ENCSR474DCX_3 A549 Epithelium Lung CEBPB [Search on ENCODE]
ENCSR535HFQ_2 A549 Epithelium Lung FOSL2 [Search on ENCODE]
ENCSR563GCV_3 A549 Epithelium Lung FOSL2 [Search on ENCODE]
ENCSR593DGU_2 A549 Epithelium Lung FOSL2 [Search on ENCODE]
ENCSR632DCH_1 K562 Erythroblast Bone Marrow ATF3 [Search on ENCODE]
ENCSR632DCH_2 K562 Erythroblast Bone Marrow ATF3 [Search on ENCODE]
ENCSR686HIU_1 A549 Epithelium Lung FOSL2 [Search on ENCODE]
ENCSR752AQK_2 A549 Epithelium Lung CEBPB [Search on ENCODE]
ENCSR752AQK_3 A549 Epithelium Lung CEBPB [Search on ENCODE]
ENCSR803GYT_1 HEK293 Epithelium Embryonic Kidney HIC1 [Search on ENCODE]
ENCSR900RUE_2 A549 Epithelium Lung FOSL2 [Search on ENCODE]
ENCSR900RUE_3 A549 Epithelium Lung FOSL2 [Search on ENCODE]
ENCSR951SNW_1 A549 Epithelium Lung HES2 [Search on ENCODE]
GSM1856029 MDA-MB-231 Epithelium Mammary Gland GATA3 [Search on ENCODE]
GSM1919982 CFPAC-1 original PDAC cell line Pancreatic ductal KLF4 [Search on ENCODE]
GSM1842698 HCC1395 None None BRD4 [Search on ENCODE]
GSM1842697 HCC1395 None None BRD4 [Search on ENCODE]
GSM2103055 BEAS-2B Epithelium Lung NR3C1 [Search on ENCODE]
GSM2103054 BEAS-2B Epithelium Lung NR3C1 [Search on ENCODE]
GSM2103046 BEAS-2B Epithelium Lung NR3C1 [Search on ENCODE]
GSM2103045 BEAS-2B Epithelium Lung NR3C1 [Search on ENCODE]
GSM2103042 BEAS-2B Epithelium Lung NR3C1 [Search on ENCODE]
GSM2103041 BEAS-2B Epithelium Lung NR3C1 [Search on ENCODE]
GSM1917770 HCT-116 Colon cancer cell Colon ATF3 [Search on ENCODE]
GSM2042852 HT29 colorectal adenocarcinoma None NR1H3 [Search on ENCODE]
GSM2042850 HT29 colorectal adenocarcinoma None NR1H3 [Search on ENCODE]
GSM2042848 HT29 colorectal adenocarcinoma None NR1H3 [Search on ENCODE]
GSM2042846 HT29 colorectal adenocarcinoma None NR1H3 [Search on ENCODE]
GSM2042845 HT29 colorectal adenocarcinoma None NR1H2 [Search on ENCODE]
GSM2188503 None Osteoblast None CEBPB [Search on ENCODE]
GSM2330608 SUM229 Mammary carcinoma cell Breast BRD4 [Search on ENCODE]
GSM2330605 SUM229 Mammary carcinoma cell Breast BRD4 [Search on ENCODE]
GSM2330604 SUM229 Mammary carcinoma cell Breast BRD4 [Search on ENCODE]
GSM2330603 SUM159PT Mammary carcinoma cell Breast BRD4 [Search on ENCODE]
GSM2330602 SUM159PT Mammary carcinoma cell Breast BRD4 [Search on ENCODE]
GSM2330601 SUM159PT Mammary carcinoma cell Breast BRD4 [Search on ENCODE]
GSM2330600 SUM159PT Mammary carcinoma cell Breast BRD4 [Search on ENCODE]
GSM2330599 SUM159PT Mammary carcinoma cell Breast BRD4 [Search on ENCODE]
GSM2330597 SUM159PT Mammary carcinoma cell Breast BRD4 [Search on ENCODE]
GSM2330596 SUM159PT Mammary carcinoma cell Breast BRD4 [Search on ENCODE]
GSM2330595 SUM159PT Mammary carcinoma cell Breast BRD4 [Search on ENCODE]
GSM2330593 SUM159PT Mammary carcinoma cell Breast BRD4 [Search on ENCODE]
GSM2330592 SUM159PT Mammary carcinoma cell Breast BRD4 [Search on ENCODE]
GSM2330591 SUM159PT Mammary carcinoma cell Breast BRD4 [Search on ENCODE]
GSM2330590 SUM159PT Mammary carcinoma cell Breast BRD4 [Search on ENCODE]
GSM2330589 SUM159PT Mammary carcinoma cell Breast BRD4 [Search on ENCODE]
GSM2330587 SUM159PT Mammary carcinoma cell Breast BRD4 [Search on ENCODE]
GSM2330586 SUM159PT Mammary carcinoma cell Breast EP300 [Search on ENCODE]
GSM2330585 SUM159PT Mammary carcinoma cell Breast EP300 [Search on ENCODE]
GSM2330584 SUM159PT Mammary carcinoma cell Breast EP300 [Search on ENCODE]
GSM2330583 SUM159PT Mammary carcinoma cell Breast EP300 [Search on ENCODE]
GSM2330582 SUM159PT Mammary carcinoma cell Breast BRD4 [Search on ENCODE]
GSM2330581 SUM159PT Mammary carcinoma cell Breast BRD4 [Search on ENCODE]
GSM2330580 SUM159PT Mammary carcinoma cell Breast BRD4 [Search on ENCODE]
GSM2330579 SUM159PT Mammary carcinoma cell Breast BRD4 [Search on ENCODE]
GSM2330568 SUM159PT None Breast CEBPB [Search on ENCODE]
GSM2330567 SUM159PT None Breast CEBPB [Search on ENCODE]
GSM2330566 SUM159PT None Breast CEBPB [Search on ENCODE]
GSM2330565 SUM159PT None Breast CEBPB [Search on ENCODE]
GSM2330560 SUM159PT Mammary carcinoma cell Breast EP300 [Search on ENCODE]
GSM2501568 MDA-MB-231 None Breast TP53 [Search on ENCODE]
GSM2550216 None Fibroblast None EP300 [Search on ENCODE]
GSM2550237 None Progenitor Cells None EP300 [Search on ENCODE]
GSM2802949 hMSC-TERT4 None None MED1 [Search on ENCODE]
GSM2635313 MG-63 Osteosarcoma cell None FOS [Search on ENCODE]
GSM2519942 None None Muscle NR3C1 [Search on ENCODE]
GSM2519945 None None Muscle NR3C1 [Search on ENCODE]
GSM2519944 None None Muscle NR3C1 [Search on ENCODE]
GSM2519947 None None Muscle NR3C1 [Search on ENCODE]
GSM2519949 None None Muscle NR3C1 [Search on ENCODE]
GSM2519948 None None Muscle NR3C1 [Search on ENCODE]
GSM2409676 TTC1240 None Malignant rhabdoid tumor SMARCB1 [Search on ENCODE]
GSM722423 U937 None Pleura CEBPA [Search on ENCODE]
GSM2394414 JHU-06 Endothelial Cell None JUN [Search on ENCODE]
GSM2394415 JHU-06 Endothelial Cell None JUN [Search on ENCODE]
GSM2055563 HeLa Epithelium Cervix POLR2A [Search on ENCODE]
GSM2409689 HS-ES-2M Embryonic Stem Cell epithelioid sarcoma SMARCC1 [Search on ENCODE]
GSM2519950 None None Muscle KLF15 [Search on ENCODE]
GSM2576177 JHU-06 Endothelial Cell None JUN [Search on ENCODE]
GSM2576176 JHU-06 Endothelial Cell None JUN [Search on ENCODE]
GSM2802955 hMSC-TERT4 None None MED1 [Search on ENCODE]
GSM2550258 None Fibroblast None EP300 [Search on ENCODE]
GSM2409708 TTC1240 None Malignant rhabdoid tumor SS18 [Search on ENCODE]
GSM2802951 hMSC-TERT4 None None MED1 [Search on ENCODE]
GSM2977010 None Keratinocyte None PRMT1 [Search on ENCODE]
GSM2394422 JHU-06 Endothelial Cell None RELA [Search on ENCODE]
GSM2394421 JHU-06 Endothelial Cell None RELA [Search on ENCODE]
Contents
Description
  • Overlapped Record Details
An overlapped record means a match between VIS and 1 of 3 Cistrome factor (histone modification, transcription factor binding site and chromatin accessibility), more specifically, this match includes at least 1 overlap between this VIS and 1 Cistrome factor-related sample from 1 of 3 Cistrome factor data. So one VIS may have several overlaps with multiple Cistrome factor-related samples, the associated factor and overlap amount of samples could indicate that the virus integration site is a potentially functional DNA element.