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HIV VIS-Cistrome Factor Overlapped Record Details

This pages show details of Cistrome factor-ralated samples which overlapped this VIS.
The cistrome refers to "the set of cis-acting targets of a trans-acting factor on a genome-wide scale."


Location chr1: 32789398-32789399 (GRCh38)
GSMID or ENCODE Cell line Cell type Tissue type Factor
GSM621759 None Satellite Cells Muscle H3K4me1 [Search on ENCODE]
GSM621752 None Satellite Cells Muscle H3K4me1 [Search on ENCODE]
GSM621741 None Satellite Cells Muscle H3K4me1 [Search on ENCODE]
GSM669892 HUES6 Embryonic Stem Cell Embryo H3K36me3 [Search on ENCODE]
GSM521870 IMR90 Fibroblast Lung H2BK120ac [Search on ENCODE]
GSM521884 IMR90 Fibroblast Lung H3K18ac [Search on ENCODE]
GSM534482 None Stromal Cell Adipose H3K27ac [Search on ENCODE]
GSM534475 None Stromal Cell Adipose H3K27ac [Search on ENCODE]
GSM646463 NHEK Keratinocyte Skin H3K4me1 [Search on ENCODE]
GSM646457 NHEK Keratinocyte Skin H3K27ac [Search on ENCODE]
GSM534474 None Stromal Cell Adipose H3K4me1 [Search on ENCODE]
GSM670024 None Chondrocyte Cartilage H3K4me1 [Search on ENCODE]
GSM669911 None Mesenchymal Stem Cell Bone Marrow H3K4me1 [Search on ENCODE]
GSM621402 None Mesenchymal Stem Cell Bone Marrow H3K4me1 [Search on ENCODE]
GSM534473 None Stromal Cell Adipose H3K4me2 [Search on ENCODE]
GSM916058 None Mesenchymal Stem Cell Bone Marrow H3K27ac [Search on ENCODE]
GSM1112787 None Mesenchymal Stem Cell Bone Marrow H3K27ac [Search on ENCODE]
GSM1112797 None Mesenchymal Stem Cell Bone Marrow H3K27ac [Search on ENCODE]
GSM1112792 None Mesenchymal Stem Cell Bone Marrow H3K27ac [Search on ENCODE]
GSM1112794 None Mesenchymal Stem Cell Bone Marrow H3K27ac [Search on ENCODE]
GSM1112793 None Mesenchymal Stem Cell Bone Marrow H3K27ac [Search on ENCODE]
GSM1112798 None Mesenchymal Stem Cell Bone Marrow H3K27ac [Search on ENCODE]
GSM883681 None Epithelium Colon H3K27ac [Search on ENCODE]
GSM883659 None Epithelium Colon H3K4me1 [Search on ENCODE]
GSM883658 None Epithelium Colon H3K4me1 [Search on ENCODE]
GSM1204475 MDA-MB-231 Epithelium Breast H3K27ac [Search on ENCODE]
GSM1261674 None None Pancreatic Islet H3K27ac [Search on ENCODE]
GSM798322 HeLa-S3 Epithelium Cervix H3K4me1 [Search on ENCODE]
GSM733698 NHEK Keratinocyte Skin H3K4me1 [Search on ENCODE]
GSM733674 NHEK Keratinocyte Skin H3K27ac [Search on ENCODE]
GSM733646 NHLF Fibroblast Lung H3K27ac [Search on ENCODE]
GSM733739 None Osteoblast Bone H3K27ac [Search on ENCODE]
GSM1517556 SK-N-MC None Brain H3K27ac [Search on ENCODE]
GSM1517574 A673 Polygonal Muscle H3K27ac [Search on ENCODE]
GSM1418961 IMR90 Fibroblast Lung H3K4me1 [Search on ENCODE]
GSM1526934 IMR90 Fibroblast Lung H3K4me2 [Search on ENCODE]
GSM1526935 IMR90 Fibroblast Lung H3K4me2 [Search on ENCODE]
GSM1566553 KB Cell Epithelium HeLa contaminant H3K4me1 [Search on ENCODE]
GSM1566555 KB Cell Epithelium HeLa contaminant H3K4me1 [Search on ENCODE]
GSM1566556 KB Cell Epithelium HeLa contaminant H3K4me1 [Search on ENCODE]
GSM1566557 KB Cell Epithelium HeLa contaminant H3K27ac [Search on ENCODE]
GSM1566559 KB Cell Epithelium HeLa contaminant H3K27ac [Search on ENCODE]
GSM1446921 None Keratinocyte None H3K27ac [Search on ENCODE]
GSM1446922 None Keratinocyte None H3K27ac [Search on ENCODE]
GSM1663010 EEC16 Epithelium Endometrium H3K27ac [Search on ENCODE]
GSM1663036 IOE11 Epithelium Ovary H3K27ac [Search on ENCODE]
GSM1663045 IOE4 Epithelium Ovary H3K27ac [Search on ENCODE]
GSM1550992 GM19093 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1517087 HeLa Epithelium Cervix H3K4me1 [Search on ENCODE]
GSM1517088 HeLa Epithelium Cervix H3K4me1 [Search on ENCODE]
GSM1576986 None Mesenchymal Stem Cell Umbilical Cord H3K27ac [Search on ENCODE]
GSM1576989 None Mesenchymal Stem Cell Umbilical Cord H3K27ac [Search on ENCODE]
GSM1819894 K562 Erythroblast Bone Marrow H3K9me3 [Search on ENCODE]
GSM1866094 None None Brain H3K27ac [Search on ENCODE]
GSM1645724 None Keratinocyte None H3K27ac [Search on ENCODE]
GSM1645725 None Keratinocyte None H3K27ac [Search on ENCODE]
GSM1889909 caki-1 None Kidney H3K4me3 [Search on ENCODE]
GSM1553137 SUM159R None None H3K27ac [Search on ENCODE]
GSM1862996 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1915113 IMR90 Fibroblast Lung H3K27ac [Search on ENCODE]
GSM1915114 IMR90 Fibroblast Lung H3K27ac [Search on ENCODE]
GSM1915115 IMR90 Fibroblast Lung H3K27ac [Search on ENCODE]
GSM1953839 LOX-IMVI Melanoma Cell None H3K27ac [Search on ENCODE]
GSM2029133 HeLa Epithelium Cervix H3K27ac [Search on ENCODE]
GSM2029136 HeLa Epithelium Cervix H3K27ac [Search on ENCODE]
GSM2098177 IMR90 Fibroblast Lung H3K27ac [Search on ENCODE]
GSM2098178 IMR90 Fibroblast Lung H3K27ac [Search on ENCODE]
GSM1607405 None Stem cell Foreskin H3K27ac [Search on ENCODE]
GSM2066433 NCI-H2087 None Lung H3K27ac [Search on ENCODE]
GSM2066435 HCC1954 Epithelium Mammary Gland H3K27ac [Search on ENCODE]
ENCSR007YOT_1 None Fibroblast None H3K27ac [Search on ENCODE]
ENCSR007YOT_2 None Fibroblast None H3K27ac [Search on ENCODE]
ENCSR007YOT_3 None Fibroblast None H3K27ac [Search on ENCODE]
ENCSR007YOT_4 None Fibroblast None H3K27ac [Search on ENCODE]
ENCSR124MTJ_1 None Fibroblast None H3K4me2 [Search on ENCODE]
ENCSR124MTJ_2 None Fibroblast None H3K4me2 [Search on ENCODE]
ENCSR124MTJ_3 None Fibroblast None H3K4me2 [Search on ENCODE]
ENCSR148FWR_1 None None gastrocnemius medialis H3K4me1 [Search on ENCODE]
ENCSR215DID_1 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR340NAL_3 A549 Epithelium Lung H3K27ac [Search on ENCODE]
ENCSR350EFV_3 A549 Epithelium Lung H3K27ac [Search on ENCODE]
ENCSR410BCN_1 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR543ZVZ_2 A549 Epithelium Lung H3K27ac [Search on ENCODE]
ENCSR555EAA_2 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR564IGJ_1 SK-N-SH Neuroblastoma cell Brain H3K27ac [Search on ENCODE]
ENCSR566UMF_1 PC-3 Epithelium Prostate H3K4me1 [Search on ENCODE]
ENCSR716XDB_1 A549 Epithelium Lung H3K27ac [Search on ENCODE]
ENCSR716XDB_3 A549 Epithelium Lung H3K27ac [Search on ENCODE]
ENCSR752UOD_1 MCF-7 Epithelium Breast H3K27ac [Search on ENCODE]
ENCSR752UOD_2 MCF-7 Epithelium Breast H3K27ac [Search on ENCODE]
ENCSR766NHB_1 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR774KCU_2 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR826UTD_1 PC-3 Epithelium Prostate H3K27ac [Search on ENCODE]
ENCSR826UTD_2 PC-3 Epithelium Prostate H3K27ac [Search on ENCODE]
ENCSR906NGD_1 None Fibroblast None H3K4me1 [Search on ENCODE]
ENCSR906NGD_2 None Fibroblast None H3K4me1 [Search on ENCODE]
ENCSR906NGD_4 None Fibroblast None H3K4me1 [Search on ENCODE]
GSM832838 IMR90 Fibroblast Lung H2BK5ac [Search on ENCODE]
GSM2188467 None Osteoblast None H3K27ac [Search on ENCODE]
GSM2188466 None Osteoblast None H3K27ac [Search on ENCODE]
GSM2263009 None Monocyte Blood H3K27ac [Search on ENCODE]
GSM2262992 None Monocyte Blood H3K27ac [Search on ENCODE]
GSM2262988 None Monocyte Blood H3K27ac [Search on ENCODE]
GSM2262963 None Monocyte Blood H3K27ac [Search on ENCODE]
GSM2262932 None Monocyte Blood H3K27ac [Search on ENCODE]
GSM1970133 MRC5 Fibroblast Lung H3K27ac [Search on ENCODE]
GSM1970132 MRC5 Fibroblast Lung H3K27ac [Search on ENCODE]
GSM2330564 SUM159PT Mammary carcinoma cell Breast H3K27ac [Search on ENCODE]
GSM2330563 SUM159PT Mammary carcinoma cell Breast H3K27ac [Search on ENCODE]
GSM772798 HUES48 Embryonic Stem Cell Embryo H3K36me3 [Search on ENCODE]
GSM772816 None Mesenchymal Stem Cell Adipose H3K4me1 [Search on ENCODE]
GSM2058045 V703 Colorectal cancer cell line None H3K27ac [Search on ENCODE]
GSM2265672 HCT-116 None Colon H3K27ac [Search on ENCODE]
GSM1422981 None Melanocytic cell None H3K27ac [Search on ENCODE]
GSM2308934 None hTERT immortalized endometriosis cells None H3K27ac [Search on ENCODE]
GSM1709279 U2OS None Bone H3K56ac [Search on ENCODE]
GSM1709278 U2OS None Bone H3K56ac [Search on ENCODE]
GSM1709274 U2OS None Bone H3K18ac [Search on ENCODE]
GSM2094322 None Macrophage Blood H4ac [Search on ENCODE]
GSM1876036 None Smooth Muscle Cell Coronary artery smooth muscle H3K27ac [Search on ENCODE]
GSM1607403 None Stem cell Foreskin H3K4me3 [Search on ENCODE]
GSM2263013 None Monocyte Blood H3K4me1 [Search on ENCODE]
GSM2262979 None Monocyte Blood H3K4me1 [Search on ENCODE]
GSM2058076 V432 None None H3K4me1 [Search on ENCODE]
GSM2058064 HCT-116 None None H3K4me1 [Search on ENCODE]
GSM1422979 None Melanocytic cell None H3K18ac [Search on ENCODE]
GSM1422976 None Melanocytic cell None H2BK5ac [Search on ENCODE]
GSM1422974 None Melanocytic cell None H2BK120ac [Search on ENCODE]
GSM1422904 None Melanocytic cell None H2BK5ac [Search on ENCODE]
GSM2550212 None Fibroblast None H3K27ac [Search on ENCODE]
GSM2356643 BICR16 squamous cell carcinoma Head and neck H3K27ac [Search on ENCODE]
GSM2550233 None Progenitor Cells None H3K27ac [Search on ENCODE]
GSM2532775 RKO Epithelium Colon H3K27ac [Search on ENCODE]
GSM1915002 MG-63 Osteosarcoma cell None H3K4me1 [Search on ENCODE]
GSM1915001 MG-63 Osteosarcoma cell None H3K27ac [Search on ENCODE]
GSM2258705 MCF-10A Epithelium Breast H3K27ac [Search on ENCODE]
GSM2258704 MCF-10A Epithelium Breast H3K27ac [Search on ENCODE]
GSM2667961 HCT-116 None HCT116 H3K27ac [Search on ENCODE]
GSM2667960 HCT-116 None HCT116 H3K27ac [Search on ENCODE]
GSM2258728 MCF-7 Epithelium Breast H3K4me1 [Search on ENCODE]
GSM2816752 None Epithelium None H3K27ac [Search on ENCODE]
GSM2712765 HCT-116 None HCT116 H3K4me1 [Search on ENCODE]
GSM2060770 PrEC Epithelium Prostate H3K4me1 [Search on ENCODE]
GSM2247241 None Keratinocyte None H3K27ac [Search on ENCODE]
GSM2247242 None Keratinocyte None H3K27ac [Search on ENCODE]
GSM2247243 JHU-06 Keratinocyte None H3K27ac [Search on ENCODE]
GSM2247245 None Keratinocyte None H3K27ac [Search on ENCODE]
GSM2247246 JHU-06 Keratinocyte None H3K27ac [Search on ENCODE]
GSM2711386 HCT-116 None HCT116 H3K4me1 [Search on ENCODE]
GSM721136 HCC1954 Epithelium Mammary Gland H3K27ac [Search on ENCODE]
GSM2664030 Ishikawa Epithelium Uterus H3K27ac [Search on ENCODE]
GSM2664031 Ishikawa Epithelium Uterus H3K27ac [Search on ENCODE]
GSM2664032 Ishikawa Epithelium Uterus H3K27ac [Search on ENCODE]
GSM2498490 breast triple negative tumor cell line BCSC1 None Breast H3K9me3 [Search on ENCODE]
GSM2784716 BICR31 squamous cell carcinoma Head and neck H3K27ac [Search on ENCODE]
GSM2301909 IMEC Epithelium Breast H3K4me3 [Search on ENCODE]
GSM2258848 MB231 None Breast H3K27ac [Search on ENCODE]
GSM2394410 JHU-06 Endothelial Cell None H3K4me2 [Search on ENCODE]
GSM2301920 RPM-MC Epithelium None H3K27ac [Search on ENCODE]
GSM2258866 MB436 None Breast H3K27ac [Search on ENCODE]
GSM2809617 HCT-116 None Colon H3K27ac [Search on ENCODE]
GSM1914993 LM7 Osteosarcoma cell None H3K27ac [Search on ENCODE]
GSM2667958 HCT-116 None HCT116 H3K27ac [Search on ENCODE]
GSM2258710 MCF-10A Epithelium Breast H3K4me1 [Search on ENCODE]
GSM2309430 MDA-MB-231 mDA None H3K4me1 [Search on ENCODE]
GSM2060768 PrEC Epithelium Prostate H3K27ac [Search on ENCODE]
GSM2496165 None Keratinocyte None H3K27ac [Search on ENCODE]
GSM2496164 None Keratinocyte None H3K27ac [Search on ENCODE]
GSM2496166 None Keratinocyte None H3K27ac [Search on ENCODE]
GSM2496161 None Keratinocyte None H3K27ac [Search on ENCODE]
GSM2496160 None Keratinocyte None H3K27ac [Search on ENCODE]
GSM2496163 None Keratinocyte None H3K27ac [Search on ENCODE]
GSM2496162 None Keratinocyte None H3K27ac [Search on ENCODE]
GSM2356646 CAL33 squamous cell carcinoma Head and neck H3K27ac [Search on ENCODE]
GSM2723868 786-O Epithelium Kidney H3K27ac [Search on ENCODE]
GSM2712755 HCT-116 None HCT116 H3K9ac [Search on ENCODE]
GSM2550191 None Progenitor Cells None H3K27ac [Search on ENCODE]
GSM2550193 None Progenitor Cells None H3 [Search on ENCODE]
GSM2723838 A-498 None None H3K27ac [Search on ENCODE]
GSM466737 H1 Embryonic Stem Cell Embryo H3K36me3 [Search on ENCODE]
GSM2700776 SK-N-AS Neuroblast Brain H3K27ac [Search on ENCODE]
GSM2301915 IMEC Epithelium Breast H3K27ac [Search on ENCODE]
GSM2301914 IMEC Epithelium Breast H3K4me3 [Search on ENCODE]
GSM2550257 None Fibroblast None H3K4me3 [Search on ENCODE]
GSM2550254 None Fibroblast None H3K27ac [Search on ENCODE]
GSM2394405 JHU-06 Endothelial Cell None H3K27ac [Search on ENCODE]
GSM2394406 JHU-06 Endothelial Cell None H3K27ac [Search on ENCODE]
GSM2809621 HCT-116 None Colon H3K4me1 [Search on ENCODE]
GSM2571031 HCT-116 None HCT116 H3K27ac [Search on ENCODE]
GSM2571030 HCT-116 None HCT116 H3K27ac [Search on ENCODE]
Contents
Description
  • Overlapped Record Details
An overlapped record means a match between VIS and 1 of 3 Cistrome factor (histone modification, transcription factor binding site and chromatin accessibility), more specifically, this match includes at least 1 overlap between this VIS and 1 Cistrome factor-related sample from 1 of 3 Cistrome factor data. So one VIS may have several overlaps with multiple Cistrome factor-related samples, the associated factor and overlap amount of samples could indicate that the virus integration site is a potentially functional DNA element.