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HIV VIS-Cistrome Factor Overlapped Record Details

This pages show details of Cistrome factor-ralated samples which overlapped this VIS.
The cistrome refers to "the set of cis-acting targets of a trans-acting factor on a genome-wide scale."


Location chr1: 37497945-37498309 (GRCh38)
GSMID or ENCODE Cell line Cell type Tissue type Factor
GSM686938 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM759666 LNCaP Epithelium Prostate H3K4me2 [Search on ENCODE]
GSM588569 MCF-7 Epithelium Breast H3K4me1 [Search on ENCODE]
GSM894066 H128 Epithelium Lung H3K27ac [Search on ENCODE]
GSM894073 H2171 Epithelium Lung H3K4me3 [Search on ENCODE]
GSM894067 H2171 Epithelium Lung H3K27ac [Search on ENCODE]
GSM317595 None Proerythroblast Blood H3K36me3 [Search on ENCODE]
GSM910576 None None Pancreas H3K4me1 [Search on ENCODE]
GSM910559 None None Sigmoid Colon H3K27ac [Search on ENCODE]
GSM537706 None Hepatocyte Liver H3K4me1 [Search on ENCODE]
GSM1013122 None None Stomach H3K27ac [Search on ENCODE]
GSM1013149 None None Pancreas H3K4me1 [Search on ENCODE]
GSM1058772 None Epithelium Fetal Small Intestine H3K36me3 [Search on ENCODE]
GSM1112795 None None Rectal Mucosa H3K27ac [Search on ENCODE]
GSM883683 None Epithelium Colon H3K27ac [Search on ENCODE]
GSM883656 None Epithelium Colon H3K4me1 [Search on ENCODE]
GSM883659 None Epithelium Colon H3K4me1 [Search on ENCODE]
GSM883663 None None Colon Crypt H3K4me1 [Search on ENCODE]
GSM883658 None Epithelium Colon H3K4me1 [Search on ENCODE]
GSM1055821 IMR90 Fibroblast Lung H3K36me3 [Search on ENCODE]
GSM1138597 DU145 Epithelium Prostate H3K27me3 [Search on ENCODE]
GSM1164232 GM19239 Lymphoblastoid Blood H3K27ac [Search on ENCODE]
GSM1233879 GM10847 Lymphoblastoid Blood H3K4me1 [Search on ENCODE]
GSM1233902 GM12878 B Lymphocyte Blood H3K4me1 [Search on ENCODE]
GSM1233904 GM12878 B Lymphocyte Blood H3K4me1 [Search on ENCODE]
GSM1233925 GM12890 Lymphoblastoid Blood H3K4me1 [Search on ENCODE]
GSM1233944 GM12891 Lymphoblastoid Blood H3K4me1 [Search on ENCODE]
GSM1233968 GM12892 Lymphoblastoid Blood H3K4me1 [Search on ENCODE]
GSM1233986 GM18486 Lymphoblastoid Blood H3K4me1 [Search on ENCODE]
GSM1233987 GM18486 Lymphoblastoid Blood H3K4me1 [Search on ENCODE]
GSM1234001 GM18505 Lymphoblastoid Blood H3K4me1 [Search on ENCODE]
GSM1234018 GM18526 Lymphoblastoid Blood H3K4me1 [Search on ENCODE]
GSM1234019 GM18526 Lymphoblastoid Blood H3K4me1 [Search on ENCODE]
GSM1234036 GM18951 Lymphoblastoid Blood H3K4me1 [Search on ENCODE]
GSM1234070 GM19193 Lymphoblastoid Blood H3K4me1 [Search on ENCODE]
GSM1234088 GM19238 Lymphoblastoid Blood H3K4me1 [Search on ENCODE]
GSM1234089 GM19238 Lymphoblastoid Blood H3K4me1 [Search on ENCODE]
GSM1234090 GM19238 Lymphoblastoid Blood H3K4me1 [Search on ENCODE]
GSM1234110 GM19239 Lymphoblastoid Blood H3K4me1 [Search on ENCODE]
GSM1234111 GM19239 Lymphoblastoid Blood H3K4me1 [Search on ENCODE]
GSM1234112 GM19239 Lymphoblastoid Blood H3K4me1 [Search on ENCODE]
GSM1234132 GM19240 Lymphoblastoid Blood H3K4me1 [Search on ENCODE]
GSM1234133 GM19240 Lymphoblastoid Blood H3K4me1 [Search on ENCODE]
GSM1234134 GM19240 Lymphoblastoid Blood H3K4me1 [Search on ENCODE]
GSM1234148 GM2255 Lymphoblastoid Blood H3K27ac [Search on ENCODE]
GSM1234153 GM2255 Lymphoblastoid Blood H3K4me1 [Search on ENCODE]
GSM1234154 GM2255 Lymphoblastoid Blood H3K4me1 [Search on ENCODE]
GSM1234171 GM2588 Lymphoblastoid Blood H3K4me1 [Search on ENCODE]
GSM1234207 GM2630 Lymphoblastoid Blood H3K4me1 [Search on ENCODE]
GSM1234208 GM2630 Lymphoblastoid Blood H3K4me1 [Search on ENCODE]
GSM1240112 HCT-116 None Colon H3K4me1 [Search on ENCODE]
GSM1240814 GP5d None Colon H3K4me1 [Search on ENCODE]
GSM1240828 GP5d None Colon H3K4me1 [Search on ENCODE]
GSM1296643 HT29 Epithelium Colon H3K27ac [Search on ENCODE]
GSM1326447 None Endothelial Cell Artery H3 [Search on ENCODE]
GSM1119128 None Cortex Brain H3K27ac [Search on ENCODE]
GSM1399017 None Multiple myeloma None H3K36me3 [Search on ENCODE]
GSM1399263 H1 Embryonic Stem Cell Embryo H3K4me1 [Search on ENCODE]
GSM1435514 GM19238 Lymphoblastoid Blood H3K4me1 [Search on ENCODE]
GSM1435516 GM19239 Lymphoblastoid Blood H3K4me1 [Search on ENCODE]
GSM1566554 KB Cell Epithelium HeLa contaminant H3K4me1 [Search on ENCODE]
GSM1420850 GM19210 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1420868 GM19239 Lymphoblastoid Blood H3K27ac [Search on ENCODE]
GSM1420878 GM18912 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1420896 GM19114 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1420897 GM19147 Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1316303 CyT49 Embryonic Stem Cell Embryo H3K4me1 [Search on ENCODE]
GSM1482878 HeLa Epithelium Cervix H3K4me3 [Search on ENCODE]
GSM1550801 GM18859 Lymphoblastoid None H3K4me1 [Search on ENCODE]
GSM1550820 GM19127 Lymphoblastoid None H3K4me1 [Search on ENCODE]
GSM1550824 GM19206 Lymphoblastoid None H3K4me1 [Search on ENCODE]
GSM1550827 GM18862 Lymphoblastoid None H3K4me1 [Search on ENCODE]
GSM1550832 GM18870 Lymphoblastoid None H3K4me1 [Search on ENCODE]
GSM1550838 GM18516 Lymphoblastoid Blood H3K4me1 [Search on ENCODE]
GSM1550843 GM18504 Lymphoblastoid None H3K4me1 [Search on ENCODE]
GSM1550847 GM18856 Lymphoblastoid None H3K4me1 [Search on ENCODE]
GSM1550850 GM18517 Lymphoblastoid None H3K4me1 [Search on ENCODE]
GSM1550856 GM19190 Lymphoblastoid None H3K4me1 [Search on ENCODE]
GSM1550857 GM18507 Lymphoblastoid Blood H3K27ac [Search on ENCODE]
GSM1550860 GM18520 Lymphoblastoid None H3K4me1 [Search on ENCODE]
GSM1550866 GM19171 Lymphoblastoid None H3K4me1 [Search on ENCODE]
GSM1550868 GM19131 Lymphoblastoid None H3K4me1 [Search on ENCODE]
GSM1550872 None Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1550879 GM18912 Lymphoblastoid None H3K4me1 [Search on ENCODE]
GSM1550887 GM18502 Lymphoblastoid None H3K4me1 [Search on ENCODE]
GSM1550890 GM19200 Lymphoblastoid Blood H3K4me1 [Search on ENCODE]
GSM1550901 GM18510 Lymphoblastoid None H3K4me1 [Search on ENCODE]
GSM1550907 None Lymphoblastoid None H3K4me1 [Search on ENCODE]
GSM1550911 GM19093 Lymphoblastoid None H3K4me1 [Search on ENCODE]
GSM1550912 GM18502 Lymphoblastoid None H3K4me1 [Search on ENCODE]
GSM1550935 GM19099 Lymphoblastoid Blood H3K4me1 [Search on ENCODE]
GSM1550939 GM19130 Lymphoblastoid None H3K4me1 [Search on ENCODE]
GSM1550943 GM18499 Lymphoblastoid None H3K4me1 [Search on ENCODE]
GSM1550949 GM18498 Lymphoblastoid None H3K4me1 [Search on ENCODE]
GSM1550953 GM19257 Lymphoblastoid None H3K4me1 [Search on ENCODE]
GSM1550956 GM19204 Lymphoblastoid Blood H3K4me1 [Search on ENCODE]
GSM1550962 GM18909 Lymphoblastoid None H3K4me1 [Search on ENCODE]
GSM1550963 GM19138 Lymphoblastoid None H3K4me1 [Search on ENCODE]
GSM1550964 None Lymphoblastoid None H3K4me1 [Search on ENCODE]
GSM1550967 GM19147 Lymphoblastoid None H3K4me1 [Search on ENCODE]
GSM1550974 GM19152 Lymphoblastoid None H3K4me1 [Search on ENCODE]
GSM1550976 None Lymphoblastoid None H3K27ac [Search on ENCODE]
GSM1550979 GM18508 Lymphoblastoid Blood H3K4me1 [Search on ENCODE]
GSM1550994 GM18858 Lymphoblastoid None H3K4me1 [Search on ENCODE]
GSM1550997 GM18501 Lymphoblastoid None H3K4me1 [Search on ENCODE]
GSM1551003 None Lymphoblastoid None H3K4me1 [Search on ENCODE]
GSM1551017 GM19144 Lymphoblastoid None H3K4me1 [Search on ENCODE]
GSM1647626 A549 Epithelium Lung H3K4me3 [Search on ENCODE]
GSM1647627 A549 Epithelium Lung H3K4me3 [Search on ENCODE]
GSM1862987 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1862988 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1862989 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1862990 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1862997 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1862999 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1863002 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1863003 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1890734 HT29 None Colon H3K27ac [Search on ENCODE]
GSM1890754 LS180 Epithelium Colon H3K27ac [Search on ENCODE]
GSM2042876 HT29 None Colon H3K27ac [Search on ENCODE]
GSM2042880 HT29 None Colon H3K27ac [Search on ENCODE]
GSM2144767 None None endometrioid adenocarcinoma H3K27ac [Search on ENCODE]
GSM1574235 Capan-1 None Pancreatic ductal H3K27ac [Search on ENCODE]
GSM1574282 CFPAC-1 Epithelium Pancreas H3K27ac [Search on ENCODE]
ENCSR086YIH_2 MM.1S B Lymphoblast Blood H3K4me2 [Search on ENCODE]
ENCSR094VCE_1 MM.1S B Lymphoblast Blood H3K4me1 [Search on ENCODE]
ENCSR348TQM_1 None None Pancreas H3K4me1 [Search on ENCODE]
GSM2058033 V1106 Colorectal cancer cell line None H3K27ac [Search on ENCODE]
GSM2058021 None None Colon Crypt H3K27ac [Search on ENCODE]
GSM2467316 None None endometrioid adenocarcinoma H3K27ac [Search on ENCODE]
GSM2467312 None None endometrioid adenocarcinoma H3K27ac [Search on ENCODE]
GSM2467310 None None endometrioid adenocarcinoma H3K27ac [Search on ENCODE]
GSM2467307 None None endometrioid adenocarcinoma H3K27ac [Search on ENCODE]
GSM1574245 CFPAC-1 None Pancreatic ductal H3K4me1 [Search on ENCODE]
GSM1892655 None None FFPE H3K4me2 [Search on ENCODE]
GSM1892634 None None Snap-frozen tissue H3K4me2 [Search on ENCODE]
GSM1892632 None None Snap-frozen tissue H3K4me2 [Search on ENCODE]
GSM1862986 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1897375 MV4-11 Leukemia Cell None H3K36me3 [Search on ENCODE]
GSM2042896 HT29 colorectal adenocarcinoma None H3K27ac [Search on ENCODE]
GSM2042895 HT29 colorectal adenocarcinoma None H3K27ac [Search on ENCODE]
GSM2175575 HCT-116 Human colorectal tumor None H3K4me1 [Search on ENCODE]
GSM2175559 HCT-116 Human colorectal tumor None H3K4me1 [Search on ENCODE]
GSM1617371 None None Snap-frozen tissue H3K4me2 [Search on ENCODE]
GSM2279073 Jurkat T Lymphocyte Blood H3K27me3 [Search on ENCODE]
GSM2279071 Jurkat T Lymphocyte Blood H3K27me3 [Search on ENCODE]
GSM2058081 V576 None None H3K4me1 [Search on ENCODE]
GSM2058073 V410 None None H3K4me1 [Search on ENCODE]
GSM2058078 V457 None None H3K4me1 [Search on ENCODE]
GSM2058089 V968 None None H3K4me1 [Search on ENCODE]
GSM2058088 V940 None None H3K4me1 [Search on ENCODE]
GSM2058085 V855 None None H3K4me1 [Search on ENCODE]
GSM2058084 V852 None None H3K4me1 [Search on ENCODE]
GSM2058082 V784 None None H3K4me1 [Search on ENCODE]
GSM2058077 V456 None None H3K4me1 [Search on ENCODE]
GSM2058076 V432 None None H3K4me1 [Search on ENCODE]
GSM2058071 V206 None None H3K4me1 [Search on ENCODE]
GSM2058066 V1009 None None H3K4me1 [Search on ENCODE]
GSM2058061 None None Colon Crypt H3K4me1 [Search on ENCODE]
GSM2058059 None None Colon Crypt H3K4me1 [Search on ENCODE]
GSM2712764 HCT-116 None HCT116 H3K4me1 [Search on ENCODE]
GSM2712765 HCT-116 None HCT116 H3K4me1 [Search on ENCODE]
GSM1064373 None Epithelium None H3K4me1 [Search on ENCODE]
GSM2498490 breast triple negative tumor cell line BCSC1 None Breast H3K9me3 [Search on ENCODE]
GSM2711385 HCT-116 None HCT116 H3K4me1 [Search on ENCODE]
GSM2644051 None Hepatocyte None H3K4me1 [Search on ENCODE]
GSM2644054 None Hepatocyte None H3K4me1 [Search on ENCODE]
GSM2300290 HEK None None H3K4me2 [Search on ENCODE]
GSM2809622 HCT-116 None Colon H3K4me1 [Search on ENCODE]
GSM2809621 HCT-116 None Colon H3K4me1 [Search on ENCODE]
Contents
Description
  • Overlapped Record Details
An overlapped record means a match between VIS and 1 of 3 Cistrome factor (histone modification, transcription factor binding site and chromatin accessibility), more specifically, this match includes at least 1 overlap between this VIS and 1 Cistrome factor-related sample from 1 of 3 Cistrome factor data. So one VIS may have several overlaps with multiple Cistrome factor-related samples, the associated factor and overlap amount of samples could indicate that the virus integration site is a potentially functional DNA element.