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HIV VIS-Cistrome Factor Overlapped Record Details

This pages show details of Cistrome factor-ralated samples which overlapped this VIS.
The cistrome refers to "the set of cis-acting targets of a trans-acting factor on a genome-wide scale."


Location chr1: 198576320-198576321 (GRCh38)
GSMID or ENCODE Cell line Cell type Tissue type Factor
GSM701526 None T Lymphocyte Cord blood DNase [Search on ENCODE]
GSM701493 None B Lymphocyte Spleen DNase [Search on ENCODE]
GSM701492 None B Lymphocyte Spleen DNase [Search on ENCODE]
GSM665840 None Monocyte Blood DNase [Search on ENCODE]
GSM1024609 None Epithelium Mammary Gland DNase [Search on ENCODE]
GSM646568 GM06990 B Lymphocyte Blood DNase [Search on ENCODE]
GSM646561 None Epithelium Mammary Gland DNase [Search on ENCODE]
GSM646567 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
GSM753974 None Epithelium Mammary Gland DNase [Search on ENCODE]
GSM753973 None Epithelium Mammary Gland DNase [Search on ENCODE]
GSM909312 None Fibroblast Foreskin DNase [Search on ENCODE]
GSM1102737 None T Lymphocyte Cord blood DNase [Search on ENCODE]
GSM1102736 None Monocyte Blood DNase [Search on ENCODE]
GSM878623 None Fibroblast Fetal Skin Back DNase [Search on ENCODE]
GSM878624 None Fibroblast Fetal Skin Back DNase [Search on ENCODE]
GSM1027350 None Keratinocyte Foreskin DNase [Search on ENCODE]
GSM817195 None Keratinocyte Foreskin DNase [Search on ENCODE]
GSM817169 None Fibroblast Foreskin DNase [Search on ENCODE]
GSM817170 None Fibroblast Foreskin DNase [Search on ENCODE]
GSM1014518 None Embryonic Fibroblast Heart DNase [Search on ENCODE]
GSM1014535 RPMI-7951 Melanoma Cell Skin DNase [Search on ENCODE]
GSM1014511 None Epithelium Esophagus DNase [Search on ENCODE]
GSM1014525 None B Lymphocyte Blood DNase [Search on ENCODE]
GSM1014520 None Epithelium None DNase [Search on ENCODE]
GSM1014513 NB4 Promyelocytic cell Blood DNase [Search on ENCODE]
GSM1014538 M059J Glial Cell Brain DNase [Search on ENCODE]
GSM774241 None Fibroblast Foreskin DNase [Search on ENCODE]
GSM774240 None Fibroblast Foreskin DNase [Search on ENCODE]
GSM849025 None Epithelium Lung DNase [Search on ENCODE]
GSM849027 None Cortex Kidney DNase [Search on ENCODE]
GSM849026 None Astrocyte Brain DNase [Search on ENCODE]
GSM1220604 None B Lymphocyte Spleen DNase [Search on ENCODE]
GSM1220605 None Fibroblast Fetal Skin Back DNase [Search on ENCODE]
GSM1220608 None None Fetal Skin Upper Back DNase [Search on ENCODE]
GSM1220609 None None Fetal Skin Biceps Right DNase [Search on ENCODE]
GSM1255263 LNCaP Epithelium Prostate DNase [Search on ENCODE]
GSM1255264 LNCaP Epithelium Prostate DNase [Search on ENCODE]
GSM1255266 LNCaP Epithelium Prostate DNase [Search on ENCODE]
GSM1255268 LNCaP Epithelium Prostate DNase [Search on ENCODE]
GSM1255269 LNCaP Epithelium Prostate DNase [Search on ENCODE]
GSM1255272 LNCaP Epithelium Prostate DNase [Search on ENCODE]
GSM1255277 LNCaP Epithelium Prostate DNase [Search on ENCODE]
GSM1255278 LNCaP Epithelium Prostate DNase [Search on ENCODE]
GSM1255279 LNCaP Epithelium Prostate DNase [Search on ENCODE]
GSM1255283 LNCaP Epithelium Prostate DNase [Search on ENCODE]
GSM1338307 None Fibroblast None DNase [Search on ENCODE]
GSM1338309 None Fibroblast None DNase [Search on ENCODE]
GSM1338310 None Fibroblast None DNase [Search on ENCODE]
GSM1024765 None B Lymphocyte Blood DNase [Search on ENCODE]
GSM1024766 None B Lymphocyte Blood DNase [Search on ENCODE]
GSM736496 GM12878 B Lymphocyte Blood DNase [Search on ENCODE]
GSM736535 HA-h Astrocyte Hippocampus DNase [Search on ENCODE]
GSM736554 None Endothelial Cell Umbilical Vein DNase [Search on ENCODE]
GSM736509 None Endothelial Cell Umbilical Vein DNase [Search on ENCODE]
GSM736601 None Embryonic Fibroblast Heart DNase [Search on ENCODE]
GSM736532 None Epithelium Esophagus DNase [Search on ENCODE]
GSM736585 None Epithelium Esophagus DNase [Search on ENCODE]
GSM736510 HeLa-S3 Epithelium Cervix DNase [Search on ENCODE]
GSM736564 HeLa-S3 Epithelium Cervix DNase [Search on ENCODE]
GSM736626 HL-60 Promyeloblast Blood DNase [Search on ENCODE]
GSM736595 HL-60 Promyeloblast Blood DNase [Search on ENCODE]
GSM736634 None Epithelium Mammary Gland DNase [Search on ENCODE]
GSM736621 None Epithelium None DNase [Search on ENCODE]
GSM736549 None Cortex Kidney DNase [Search on ENCODE]
GSM736548 HRE Epithelium None DNase [Search on ENCODE]
GSM736565 LNCaP Epithelium Prostate DNase [Search on ENCODE]
GSM736603 LNCaP Epithelium Prostate DNase [Search on ENCODE]
GSM1024773 M059J Glial Cell Brain DNase [Search on ENCODE]
GSM1024794 M059J Glial Cell Brain DNase [Search on ENCODE]
GSM1024767 MCF-7 Epithelium Breast DNase [Search on ENCODE]
GSM736604 NB4 Promyelocytic cell Blood DNase [Search on ENCODE]
GSM736544 None Astrocyte Brain DNase [Search on ENCODE]
GSM736519 PANC-1 None Pancreas DNase [Search on ENCODE]
GSM1024742 PrEC Epithelium Prostate DNase [Search on ENCODE]
GSM736608 SAEC Epithelium Lung DNase [Search on ENCODE]
GSM736617 SAEC Epithelium Lung DNase [Search on ENCODE]
GSM1406342 None Macrophage Blood DNase [Search on ENCODE]
GSM1406347 None Macrophage Blood DNase [Search on ENCODE]
GSM1406349 None Monocyte Blood DNase [Search on ENCODE]
GSM1406354 None Monocyte Blood DNase [Search on ENCODE]
GSM763533 HeLa Epithelium Cervix DNase [Search on ENCODE]
GSM1581831 None Myeloid Cell None DNase [Search on ENCODE]
GSM1621352 GM12878 B Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM1565734 None Dendritic Cell None ATAC-seq [Search on ENCODE]
GSM1832752 None B Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM1832753 None B Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM1832754 None B Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM1832755 None B Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM1832756 None B Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM1832757 None B Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM1832758 None B Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM1832759 None B Lymphocyte Blood ATAC-seq [Search on ENCODE]
ENCSR240TPI_1 BJ Fibroblast Skin DNase [Search on ENCODE]
ENCSR240TPI_2 BJ Fibroblast Skin DNase [Search on ENCODE]
ENCSR346IHH_2 Daoy Polygonal Cerebellum DNase [Search on ENCODE]
ENCSR426IEA_1 KBM-7 Myeloblast Blood DNase [Search on ENCODE]
ENCSR426IEA_2 KBM-7 Myeloblast Blood DNase [Search on ENCODE]
ENCSR548MMD_1 BJ Fibroblast Skin DNase [Search on ENCODE]
ENCSR814KRX_1 HT29 None Colon DNase [Search on ENCODE]
ENCSR814KRX_2 HT29 None Colon DNase [Search on ENCODE]
ENCSR932KWJ_2 A-172 Glial Cell Brain DNase [Search on ENCODE]
ENCSR217TAW_2 None Fibroblast None DNase [Search on ENCODE]
ENCSR627GNV_2 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR000FDI_2 HT1080 None Connective Tissue DNase [Search on ENCODE]
ENCSR373BIX_2 None Dendritic Cell None DNase [Search on ENCODE]
GSM2325687 None Monocyte Blood ATAC-seq [Search on ENCODE]
GSM2325683 None Monocyte Blood ATAC-seq [Search on ENCODE]
GSM2243040 None Dendritic Cell None ATAC-seq [Search on ENCODE]
GSM2243039 None Plasmacytoid dendritic cell None ATAC-seq [Search on ENCODE]
GSM2243038 None Dendritic Cell None ATAC-seq [Search on ENCODE]
GSM2243037 None Plasmacytoid dendritic cell None ATAC-seq [Search on ENCODE]
GSM2243036 MOLM-14 acute myeloid leukemia (AML) cell line None ATAC-seq [Search on ENCODE]
GSM2243035 HL-60 Promyeloblast Blood ATAC-seq [Search on ENCODE]
GSM2243033 CAL-1 Plasmacytoid dendritic cell None ATAC-seq [Search on ENCODE]
GSM2174880 BJ Fibroblast Skin ATAC-seq [Search on ENCODE]
GSM2174877 BJ Fibroblast Skin ATAC-seq [Search on ENCODE]
GSM2174876 BJ Fibroblast Skin ATAC-seq [Search on ENCODE]
GSM2174875 BJ Fibroblast Skin ATAC-seq [Search on ENCODE]
GSM2544218 THP-1 Macrophage None ATAC-seq [Search on ENCODE]
GSM2544217 THP-1 Monocyte None ATAC-seq [Search on ENCODE]
GSM2186481 LNCaP Epithelium Prostate ATAC-seq [Search on ENCODE]
GSM2186480 LNCaP Epithelium Prostate ATAC-seq [Search on ENCODE]
GSM2186478 LNCaP Epithelium Prostate ATAC-seq [Search on ENCODE]
GSM2186477 LNCaP Epithelium Prostate ATAC-seq [Search on ENCODE]
GSM2186476 LNCaP Epithelium Prostate ATAC-seq [Search on ENCODE]
GSM2083782 None Macrophage None ATAC-seq [Search on ENCODE]
GSM2083780 None Macrophage None ATAC-seq [Search on ENCODE]
GSM2083771 None Macrophage None ATAC-seq [Search on ENCODE]
GSM2083766 None Macrophage None ATAC-seq [Search on ENCODE]
GSM2083763 None Macrophage None ATAC-seq [Search on ENCODE]
GSM816637 LNCaP Epithelium Prostate DNase [Search on ENCODE]
GSM2224597 LoVo None Colon DNase [Search on ENCODE]
GSM2679898 None Monocyte Blood ATAC-seq [Search on ENCODE]
GSM2679870 None Monocyte Blood ATAC-seq [Search on ENCODE]
GSM2430668 BJ Fibroblast Skin ATAC-seq [Search on ENCODE]
GSM2676284 MCF-10A Epithelium Breast DNase [Search on ENCODE]
GSM2679897 None Monocyte Blood ATAC-seq [Search on ENCODE]
GSM2679880 None Monocyte Blood ATAC-seq [Search on ENCODE]
GSM2679883 None Monocyte Blood ATAC-seq [Search on ENCODE]
GSM2898842 None Cardiomyocyte None ATAC-seq [Search on ENCODE]
GSM2898863 LCL Lymphoblastoid Blood ATAC-seq [Search on ENCODE]
GSM2702716 None B Lymphocyte None ATAC-seq [Search on ENCODE]
GSM2679895 None Monocyte Blood ATAC-seq [Search on ENCODE]
GSM2679896 None Monocyte Blood ATAC-seq [Search on ENCODE]
Contents
Description
  • Overlapped Record Details
An overlapped record means a match between VIS and 1 of 3 Cistrome factor (histone modification, transcription factor binding site and chromatin accessibility), more specifically, this match includes at least 1 overlap between this VIS and 1 Cistrome factor-related sample from 1 of 3 Cistrome factor data. So one VIS may have several overlaps with multiple Cistrome factor-related samples, the associated factor and overlap amount of samples could indicate that the virus integration site is a potentially functional DNA element.