Home
Virus
Gene
Disease
Dataset
Download
Help
 
HIV VIS-Cistrome Factor Overlapped Record Details

This pages show details of Cistrome factor-ralated samples which overlapped this VIS.
The cistrome refers to "the set of cis-acting targets of a trans-acting factor on a genome-wide scale."


Location chr1: 40268000-40268001 (GRCh38)
GSMID or ENCODE Cell line Cell type Tissue type Factor
GSM759662 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM759661 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM353633 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM525266 T98G None Brain EP300 [Search on ENCODE]
GSM798431 BT-474 Epithelium Mammary Gland ESR1 [Search on ENCODE]
GSM798430 BT-474 Epithelium Mammary Gland ESR1 [Search on ENCODE]
GSM1059396 LNCaP Epithelium Prostate POLR2A [Search on ENCODE]
GSM1059398 LNCaP Epithelium Prostate POLR2A [Search on ENCODE]
GSM916524 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM935551 MCF-10A Epithelium Breast STAT3 [Search on ENCODE]
GSM984392 C4-2B Epithelium Prostate FOXA1 [Search on ENCODE]
GSM984391 C4-2B Epithelium Prostate FOXA1 [Search on ENCODE]
GSM1095931 None Epithelium Cervix FAIRE [Search on ENCODE]
GSM989640 LNCaP Epithelium Prostate NKX3-1 [Search on ENCODE]
GSM951897 None Epithelium Mammary Gland HSF1 [Search on ENCODE]
GSM1122848 None Epithelium Mammary Gland FAIRE [Search on ENCODE]
GSM991662 IMR90 Fibroblast Lung E2F7 [Search on ENCODE]
GSM991660 IMR90 Fibroblast Lung E2F7 [Search on ENCODE]
GSM991663 IMR90 Fibroblast Lung E2F7 [Search on ENCODE]
GSM991661 IMR90 Fibroblast Lung E2F7 [Search on ENCODE]
GSM1038284 U87 None Brain BRD4 [Search on ENCODE]
GSM1195552 U87 None Brain BRD4 [Search on ENCODE]
GSM1195551 U87 None Brain BRD4 [Search on ENCODE]
GSM1274873 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM1291197 None None Cord blood TAL1 [Search on ENCODE]
GSM1291199 None None Cord blood TAL1 [Search on ENCODE]
GSM1328945 VCaP Epithelium Prostate AR [Search on ENCODE]
GSM1328957 VCaP Epithelium Prostate AR [Search on ENCODE]
GSM1328958 VCaP Epithelium Prostate AR [Search on ENCODE]
GSM1328959 VCaP Epithelium Prostate BRD4 [Search on ENCODE]
GSM1328960 VCaP Epithelium Prostate BRD4 [Search on ENCODE]
GSM1328963 VCaP Epithelium Prostate BRD4 [Search on ENCODE]
GSM1328968 VCaP Epithelium Prostate POLR2A [Search on ENCODE]
GSM534494 None Stromal Cell Adipose PPARG [Search on ENCODE]
GSM534493 None Stromal Cell Adipose PPARG [Search on ENCODE]
GSM935519 IMR90 Fibroblast Lung CEBPB [Search on ENCODE]
GSM935624 IMR90 Fibroblast Lung RAD21 [Search on ENCODE]
GSM1003615 IMR90 Fibroblast Lung RFX5 [Search on ENCODE]
GSM935403 IMR90 Fibroblast Lung MAFK [Search on ENCODE]
GSM1003614 IMR90 Fibroblast Lung MXI1 [Search on ENCODE]
GSM935457 MCF-10A Epithelium Breast STAT3 [Search on ENCODE]
GSM935398 MCF-10A Epithelium Breast FOS [Search on ENCODE]
GSM935400 MCF-10A Epithelium Breast E2F4 [Search on ENCODE]
GSM935491 MCF-10A Epithelium Breast MYC [Search on ENCODE]
GSM935399 MCF-10A Epithelium Breast STAT3 [Search on ENCODE]
GSM935588 MCF-10A Epithelium Breast POLR2A [Search on ENCODE]
GSM935396 MCF-10A Epithelium Breast FOS [Search on ENCODE]
GSM935397 MCF-10A Epithelium Breast FOS [Search on ENCODE]
GSM935591 MCF-10A Epithelium Breast STAT3 [Search on ENCODE]
GSM935438 MCF-10A Epithelium Breast FOS [Search on ENCODE]
GSM935441 MCF-10A Epithelium Breast MYC [Search on ENCODE]
GSM1010880 SK-N-SH Neuroblastoma cell Brain NFIC [Search on ENCODE]
GSM1010840 SK-N-SH Neuroblastoma cell Brain FOSL2 [Search on ENCODE]
GSM1010858 SK-N-SH Neuroblastoma cell Brain TEAD4 [Search on ENCODE]
GSM1010901 SK-N-SH Neuroblastoma cell Brain JUND [Search on ENCODE]
GSM1010887 SK-N-SH Neuroblastoma cell Brain PBX3 [Search on ENCODE]
GSM1010738 SK-N-SH Neuroblastoma cell Brain GATA3 [Search on ENCODE]
GSM1010900 SK-N-SH Neuroblastoma cell Brain TCF12 [Search on ENCODE]
GSM803459 U87 None Brain POLR2A [Search on ENCODE]
GSM1164145 DU145 Epithelium Prostate FOXA1 [Search on ENCODE]
GSM1164146 DU145 Epithelium Prostate FOXA1 [Search on ENCODE]
GSM1164147 DU145 Epithelium Prostate FOXA1 [Search on ENCODE]
GSM1164148 DU145 Epithelium Prostate FOXA1 [Search on ENCODE]
GSM1250896 AGS Epithelium Stomach GATA4 [Search on ENCODE]
GSM1463930 None Myoblast None MED1 [Search on ENCODE]
GSM1068136 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM1068137 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM1071284 None Epithelium Prostate AR [Search on ENCODE]
GSM1236926 LNCaP Epithelium Prostate AR [Search on ENCODE]
GSM1410789 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM1443809 hMADS-3 Adipocyte Adipose PPARG [Search on ENCODE]
GSM1443810 hMADS-3 Adipocyte Adipose PPARG [Search on ENCODE]
GSM1537678 hMADS-3 Adipocyte Adipose MED1 [Search on ENCODE]
GSM1537680 hMADS-3 Adipocyte Adipose MED1 [Search on ENCODE]
GSM1354836 VCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM1354837 VCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM1354838 VCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM1354839 VCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM1463461 VCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM1463462 VCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM1463463 VCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM1463464 VCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM1543776 LNCaP Epithelium Prostate MRE11A [Search on ENCODE]
GSM1555571 VCaP Epithelium Prostate SUMO2 [Search on ENCODE]
GSM1600544 LNCaP Epithelium Prostate GATA2 [Search on ENCODE]
GSM1503219 None None Coronary artery smooth muscle JUN [Search on ENCODE]
GSM1503220 None None Coronary artery smooth muscle JUND [Search on ENCODE]
GSM1517753 501-Mel Melanoma Cell None SMARCA4 [Search on ENCODE]
GSM1566728 None Adipocyte None MED1 [Search on ENCODE]
GSM1566732 None Adipocyte None RELA [Search on ENCODE]
GSM1566733 None Adipocyte None RELA [Search on ENCODE]
GSM1566734 None Adipocyte None RELA [Search on ENCODE]
GSM1647185 HEK293A None None MEF2B [Search on ENCODE]
GSM1684634 None Mesenchymal Stem Cell None CEBPB [Search on ENCODE]
GSM1684635 None Mesenchymal Stem Cell None CEBPB [Search on ENCODE]
GSM1684636 None Mesenchymal Stem Cell None CEBPB [Search on ENCODE]
GSM1684641 None Mesenchymal Stem Cell None CEBPB [Search on ENCODE]
GSM1684642 None Mesenchymal Stem Cell None CEBPB [Search on ENCODE]
GSM1684643 None Mesenchymal Stem Cell None CEBPB [Search on ENCODE]
GSM791411 LS180 Epithelium Colon CEBPB [Search on ENCODE]
GSM791412 LS180 Epithelium Colon CEBPB [Search on ENCODE]
GSM1542532 NCI-H2052 Epithelium Lung YAP1 [Search on ENCODE]
GSM1542533 NCI-H2052 Epithelium Lung YAP1 [Search on ENCODE]
GSM1576449 LNCaP Epithelium Prostate VDR [Search on ENCODE]
GSM1576451 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM1622626 VCaP Epithelium Prostate SUMO2 [Search on ENCODE]
GSM1777599 VCaP Epithelium Prostate SUMO2 [Search on ENCODE]
GSM1777601 VCaP Epithelium Prostate SUMO2 [Search on ENCODE]
GSM1777604 VCaP Epithelium Prostate SUMO2 [Search on ENCODE]
GSM1777606 VCaP Epithelium Prostate SUMO2 [Search on ENCODE]
GSM1777609 VCaP Epithelium Prostate SUMO2 [Search on ENCODE]
GSM1777610 VCaP Epithelium Prostate SUMO2 [Search on ENCODE]
GSM1358396 None None Prostate AR [Search on ENCODE]
GSM1358404 None None Prostate AR [Search on ENCODE]
GSM1358411 None None Prostate AR [Search on ENCODE]
GSM699634 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM699635 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM1679096 LNCaP-abl Epithelium Prostate MED1 [Search on ENCODE]
ENCSR146BGM_1 None None gastroesophageal sphincter CTCF [Search on ENCODE]
ENCSR230ZWH_1 None None Liver RAD21 [Search on ENCODE]
ENCSR230ZWH_2 None None Liver RAD21 [Search on ENCODE]
ENCSR338MMB_1 None None Liver NR2F2 [Search on ENCODE]
ENCSR338MMB_2 None None Liver NR2F2 [Search on ENCODE]
ENCSR382MOM_1 None None Liver YY1 [Search on ENCODE]
ENCSR382MOM_2 None None Liver YY1 [Search on ENCODE]
ENCSR480LIS_1 None None Liver ATF3 [Search on ENCODE]
ENCSR480LIS_2 None None Liver ATF3 [Search on ENCODE]
ENCSR516HUP_1 None None Liver ZBTB33 [Search on ENCODE]
ENCSR516HUP_2 None None Liver ZBTB33 [Search on ENCODE]
ENCSR917QNE_1 None None Liver RAD21 [Search on ENCODE]
ENCSR917QNE_2 None None Liver RAD21 [Search on ENCODE]
ENCSR957KYB_1 IMR90 Fibroblast Lung BHLHE40 [Search on ENCODE]
ENCSR957KYB_2 IMR90 Fibroblast Lung BHLHE40 [Search on ENCODE]
GSM1969223 BT-474 Human Breast Cancer Cell Breast ESRRA [Search on ENCODE]
GSM1856031 MDA-MB-231 Epithelium Mammary Gland GATA3 [Search on ENCODE]
GSM1855971 MDA-MB-231 Epithelium Mammary Gland GATA3 [Search on ENCODE]
GSM1855970 MDA-MB-231 Epithelium Mammary Gland GATA3 [Search on ENCODE]
GSM1919985 CFPAC-1 None Pancreatic ductal FOXA1 [Search on ENCODE]
GSM1873046 LNCaP Epithelium Prostate CREB1 [Search on ENCODE]
GSM1873044 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM1873043 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM1873042 LNCaP Epithelium Prostate CREB1 [Search on ENCODE]
GSM1873040 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM1873039 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM1538431 LNCaP Epithelium Prostate CREB1 [Search on ENCODE]
GSM1538430 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM1691165 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM1691164 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM1691157 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM1691154 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM1691148 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM1691142 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM1842697 HCC1395 None None BRD4 [Search on ENCODE]
GSM1586663 LNCaP Epithelium Prostate AR [Search on ENCODE]
GSM1586661 C4-2 None Prostate AR [Search on ENCODE]
GSM2058892 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM2098180 IMR90 None None BRD4 [Search on ENCODE]
GSM2098179 IMR90 None None BRD4 [Search on ENCODE]
GSM1915116 IMR90 fibrobasts None BRD4 [Search on ENCODE]
GSM1863005 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM1891832 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM1891830 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM2219875 LNCaP Epithelium Prostate PIAS1 [Search on ENCODE]
GSM2219874 LNCaP Epithelium Prostate PIAS1 [Search on ENCODE]
GSM2219873 LNCaP Epithelium Prostate PIAS1 [Search on ENCODE]
GSM2219872 LNCaP Epithelium Prostate PIAS1 [Search on ENCODE]
GSM2219867 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM2219866 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM2219865 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM2219864 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM2219863 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM2219862 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM2219861 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM2219860 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM2188502 None Osteoblast None CEBPB [Search on ENCODE]
GSM1933889 LNCaP Epithelium Prostate NANOG [Search on ENCODE]
GSM1933887 LNCaP Epithelium Prostate NANOG [Search on ENCODE]
GSM2330608 SUM229 Mammary carcinoma cell Breast BRD4 [Search on ENCODE]
GSM2330603 SUM159PT Mammary carcinoma cell Breast BRD4 [Search on ENCODE]
GSM2330602 SUM159PT Mammary carcinoma cell Breast BRD4 [Search on ENCODE]
GSM2330601 SUM159PT Mammary carcinoma cell Breast BRD4 [Search on ENCODE]
GSM2330600 SUM159PT Mammary carcinoma cell Breast BRD4 [Search on ENCODE]
GSM2330597 SUM159PT Mammary carcinoma cell Breast BRD4 [Search on ENCODE]
GSM2330596 SUM159PT Mammary carcinoma cell Breast BRD4 [Search on ENCODE]
GSM2330595 SUM159PT Mammary carcinoma cell Breast BRD4 [Search on ENCODE]
GSM2330593 SUM159PT Mammary carcinoma cell Breast BRD4 [Search on ENCODE]
GSM2330592 SUM159PT Mammary carcinoma cell Breast BRD4 [Search on ENCODE]
GSM2330591 SUM159PT Mammary carcinoma cell Breast BRD4 [Search on ENCODE]
GSM2330590 SUM159PT Mammary carcinoma cell Breast BRD4 [Search on ENCODE]
GSM2330589 SUM159PT Mammary carcinoma cell Breast BRD4 [Search on ENCODE]
GSM2330588 SUM159PT Mammary carcinoma cell Breast BRD4 [Search on ENCODE]
GSM2330586 SUM159PT Mammary carcinoma cell Breast EP300 [Search on ENCODE]
GSM2330585 SUM159PT Mammary carcinoma cell Breast EP300 [Search on ENCODE]
GSM2330584 SUM159PT Mammary carcinoma cell Breast EP300 [Search on ENCODE]
GSM2330583 SUM159PT Mammary carcinoma cell Breast EP300 [Search on ENCODE]
GSM2330582 SUM159PT Mammary carcinoma cell Breast BRD4 [Search on ENCODE]
GSM2330581 SUM159PT Mammary carcinoma cell Breast BRD4 [Search on ENCODE]
GSM2330580 SUM159PT Mammary carcinoma cell Breast BRD4 [Search on ENCODE]
GSM2330579 SUM159PT Mammary carcinoma cell Breast BRD4 [Search on ENCODE]
GSM2330568 SUM159PT None Breast CEBPB [Search on ENCODE]
GSM2330567 SUM159PT None Breast CEBPB [Search on ENCODE]
GSM2330566 SUM159PT None Breast CEBPB [Search on ENCODE]
GSM2330565 SUM159PT None Breast CEBPB [Search on ENCODE]
GSM2330560 SUM159PT Mammary carcinoma cell Breast EP300 [Search on ENCODE]
GSM2330554 SUM159PT Mammary carcinoma cell Breast MED1 [Search on ENCODE]
GSM2330550 SUM159PT Mammary carcinoma cell Breast BRD4 [Search on ENCODE]
GSM2550216 None Fibroblast None EP300 [Search on ENCODE]
GSM2550237 None Progenitor Cells None EP300 [Search on ENCODE]
GSM2802949 hMSC-TERT4 None None MED1 [Search on ENCODE]
GSM2519942 None None Muscle NR3C1 [Search on ENCODE]
GSM2519945 None None Muscle NR3C1 [Search on ENCODE]
GSM2519944 None None Muscle NR3C1 [Search on ENCODE]
GSM2519947 None None Muscle NR3C1 [Search on ENCODE]
GSM2519949 None None Muscle NR3C1 [Search on ENCODE]
GSM2519948 None None Muscle NR3C1 [Search on ENCODE]
GSM2977506 BJ Fibroblast Skin FOXA2 [Search on ENCODE]
GSM2401446 BJ Fibroblast Skin FOXA2 [Search on ENCODE]
GSM2401447 BJ Fibroblast Skin FOXA2 [Search on ENCODE]
GSM2802959 hMSC-TERT4 None None MED1 [Search on ENCODE]
GSM2401467 BJ Fibroblast Skin FOXA2 [Search on ENCODE]
GSM2409676 TTC1240 None Malignant rhabdoid tumor SMARCB1 [Search on ENCODE]
GSM2797115 None None Breast ESR1 [Search on ENCODE]
GSM2977504 BJ Fibroblast Skin FOXA2 [Search on ENCODE]
GSM2797131 None None Breast FOXA1 [Search on ENCODE]
GSM2797132 None None Breast FOXA1 [Search on ENCODE]
GSM2797135 None None Breast FOXA1 [Search on ENCODE]
GSM2277150 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM2797100 None None Breast ESR1 [Search on ENCODE]
GSM2122579 LNCaP-abl Epithelium Prostate AR [Search on ENCODE]
GSM2277151 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM2480812 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM2480813 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM2480814 LNCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM2537229 VCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM2537225 VCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM2537226 VCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM2537227 VCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM2394416 JHU-06 Endothelial Cell None JUNB [Search on ENCODE]
GSM2394414 JHU-06 Endothelial Cell None JUN [Search on ENCODE]
GSM2394415 JHU-06 Endothelial Cell None JUN [Search on ENCODE]
GSM2278004 HCC70 Epithelium Breast STAT3 [Search on ENCODE]
GSM2278005 HCC70 Epithelium Breast STAT3 [Search on ENCODE]
GSM2394399 JHU-06 Endothelial Cell None CEBPD [Search on ENCODE]
GSM2519950 None None Muscle KLF15 [Search on ENCODE]
GSM2519951 None None Muscle KLF15 [Search on ENCODE]
GSM1959092 HeLa Epithelium Cervix GATAD1 [Search on ENCODE]
GSM2797080 None None Breast FOXA1 [Search on ENCODE]
GSM2797083 None None Breast FOXA1 [Search on ENCODE]
GSM2576178 JHU-06 Endothelial Cell None JUN [Search on ENCODE]
GSM2576177 JHU-06 Endothelial Cell None JUN [Search on ENCODE]
GSM2576176 JHU-06 Endothelial Cell None JUN [Search on ENCODE]
GSM2278009 MDA-MB-468 mDA None STAT3 [Search on ENCODE]
GSM2797143 None None Breast PR [Search on ENCODE]
GSM2977490 BJ Fibroblast Skin FOXA2 [Search on ENCODE]
GSM2430675 BJ Fibroblast Skin FOXA2 [Search on ENCODE]
GSM2430674 BJ Fibroblast Skin FOXA2 [Search on ENCODE]
GSM2430676 BJ Fibroblast Skin GATA4 [Search on ENCODE]
GSM2550195 None Progenitor Cells None EP300 [Search on ENCODE]
GSM2797109 None None Breast ESR1 [Search on ENCODE]
GSM2977503 BJ Fibroblast Skin FOXA2 [Search on ENCODE]
GSM2977502 BJ Fibroblast Skin FOXA2 [Search on ENCODE]
GSM2537232 VCaP Epithelium Prostate HOXB13 [Search on ENCODE]
GSM2537230 VCaP Epithelium Prostate FOXA1 [Search on ENCODE]
GSM2550258 None Fibroblast None EP300 [Search on ENCODE]
GSM2480822 LNCaP Epithelium Prostate TLE3 [Search on ENCODE]
GSM2480824 LNCaP Epithelium Prostate TLE3 [Search on ENCODE]
GSM2802951 hMSC-TERT4 None None MED1 [Search on ENCODE]
GSM2394423 JHU-06 Endothelial Cell None RELA [Search on ENCODE]
GSM2394422 JHU-06 Endothelial Cell None RELA [Search on ENCODE]
GSM2394421 JHU-06 Endothelial Cell None RELA [Search on ENCODE]
GSM2394424 JHU-06 Endothelial Cell None RELA [Search on ENCODE]
Contents
Description
  • Overlapped Record Details
An overlapped record means a match between VIS and 1 of 3 Cistrome factor (histone modification, transcription factor binding site and chromatin accessibility), more specifically, this match includes at least 1 overlap between this VIS and 1 Cistrome factor-related sample from 1 of 3 Cistrome factor data. So one VIS may have several overlaps with multiple Cistrome factor-related samples, the associated factor and overlap amount of samples could indicate that the virus integration site is a potentially functional DNA element.