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HIV VIS-Cistrome Factor Overlapped Record Details

This pages show details of Cistrome factor-ralated samples which overlapped this VIS.
The cistrome refers to "the set of cis-acting targets of a trans-acting factor on a genome-wide scale."


Location chr1: 31911254-31911255 (GRCh38)
GSMID or ENCODE Cell line Cell type Tissue type Factor
GSM667637 H9 Embryonic Stem Cell Embryo H4K8ac [Search on ENCODE]
GSM759665 LNCaP Epithelium Prostate H3K4me2 [Search on ENCODE]
GSM686933 LNCaP Epithelium Prostate H3K4me2 [Search on ENCODE]
GSM686932 LNCaP Epithelium Prostate H3K4me2 [Search on ENCODE]
GSM686931 LNCaP Epithelium Prostate H3K4me2 [Search on ENCODE]
GSM503905 LNCaP Epithelium Prostate H3K4me2 [Search on ENCODE]
GSM503904 LNCaP Epithelium Prostate H3K4me2 [Search on ENCODE]
GSM503903 LNCaP Epithelium Prostate H3K4me2 [Search on ENCODE]
GSM353635 LNCaP Epithelium Prostate H3K4me2 [Search on ENCODE]
GSM503906 LNCaP Epithelium Prostate H3K4me3 [Search on ENCODE]
GSM971340 None B Lymphocyte Blood H3K4me1 [Search on ENCODE]
GSM969568 LNCaP-abl Epithelium Prostate H3K4me2 [Search on ENCODE]
GSM910576 None None Pancreas H3K4me1 [Search on ENCODE]
GSM646442 K562 Erythroblast Bone Marrow H3K4me2 [Search on ENCODE]
GSM534467 None Stromal Cell Adipose H3K4me1 [Search on ENCODE]
GSM646381 None Epithelium Mammary Gland H3K4me1 [Search on ENCODE]
GSM646362 HepG2 Epithelium Liver H3K4me2 [Search on ENCODE]
GSM621418 None Adipocyte Adipose H3K4me1 [Search on ENCODE]
GSM417823 None T Lymphocyte Blood H3K9me1 [Search on ENCODE]
GSM1233901 GM12878 B Lymphocyte Blood H3K36me3 [Search on ENCODE]
GSM1233922 GM12890 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1234108 GM19239 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1249447 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1249448 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1273648 None None Endoderm H3K4me2 [Search on ENCODE]
GSM1273650 None None Endoderm H3K27ac [Search on ENCODE]
GSM1273653 None Endoderm Cell Embryo H3K4me2 [Search on ENCODE]
GSM1273658 None Embryonic Stem Cell Embryo H3K4me2 [Search on ENCODE]
GSM998995 None B Lymphocyte Blood H3K4me1 [Search on ENCODE]
GSM999006 None Natural Killer Cell Blood H3K4me1 [Search on ENCODE]
GSM1003496 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
GSM733693 HepG2 Epithelium Liver H3K4me2 [Search on ENCODE]
GSM733705 None Epithelium Mammary Gland H3K4me1 [Search on ENCODE]
GSM1399017 None Multiple myeloma None H3K36me3 [Search on ENCODE]
GSM1402791 MCF-7 Epithelium Breast H3R26Cit [Search on ENCODE]
GSM1316308 CyT49 Embryonic Stem Cell Embryo H3K27ac [Search on ENCODE]
GSM1316309 CyT49 Embryonic Stem Cell Embryo H3K4me1 [Search on ENCODE]
GSM1316317 CyT49 Embryonic Stem Cell Embryo H3K4me1 [Search on ENCODE]
GSM1316323 CyT49 Embryonic Stem Cell Embryo H3K4me1 [Search on ENCODE]
GSM1316330 CyT49 Embryonic Stem Cell Embryo H3K4me1 [Search on ENCODE]
GSM1316331 CyT49 Embryonic Stem Cell Embryo H3K4me1 [Search on ENCODE]
GSM1647626 A549 Epithelium Lung H3K4me3 [Search on ENCODE]
GSM1647627 A549 Epithelium Lung H3K4me3 [Search on ENCODE]
GSM1703925 None B Lymphocyte None H3K27ac [Search on ENCODE]
GSM1679101 LNCaP-abl Epithelium Prostate H3K4me2 [Search on ENCODE]
GSM1679102 LNCaP-abl Epithelium Prostate H3K4me2 [Search on ENCODE]
GSM1679103 LNCaP-abl Epithelium Prostate H3K4me3 [Search on ENCODE]
GSM1679104 LNCaP-abl Epithelium Prostate H3K4me3 [Search on ENCODE]
GSM1847949 None T Lymphocyte Blood H3K4me3 [Search on ENCODE]
GSM1862985 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1862993 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1862996 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1862997 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1862998 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1862999 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
ENCSR016PSC_1 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR016PSC_3 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR124YCC_2 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR215DID_2 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR215DID_3 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR410BCN_1 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR410BCN_2 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR410BCN_3 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR428DFL_1 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR428DFL_3 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR555EAA_1 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR555EAA_3 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
GSM752978 H1 Embryonic Stem Cell Embryo H3K4me1 [Search on ENCODE]
GSM753426 H1 Embryonic Stem Cell Embryo H3K27ac [Search on ENCODE]
ENCSR692JHM_1 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR692JHM_2 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR766NHB_1 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR774KCU_1 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR774KCU_2 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
GSM807393 H1 Embryonic Stem Cell Embryo H2AK5ac [Search on ENCODE]
GSM807395 H1 Embryonic Stem Cell Embryo H2BK5ac [Search on ENCODE]
GSM807397 H1 Embryonic Stem Cell Embryo H3K56ac [Search on ENCODE]
ENCSR905REY_3 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR918VQU_2 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
GSM2080913 C4-2B Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1907214 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1907213 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
GSM1868869 C4-2B Epithelium Prostate H3K4me2 [Search on ENCODE]
GSM1868868 C4-2B Epithelium Prostate H3K4me2 [Search on ENCODE]
GSM2058766 LNCaP Epithelium Prostate H3K4me2 [Search on ENCODE]
GSM2058760 LNCaP Epithelium Prostate H3K4me2 [Search on ENCODE]
GSM2058746 LNCaP Epithelium Prostate H3K4me2 [Search on ENCODE]
GSM1891831 LNCaP Epithelium Prostate H3K4me2 [Search on ENCODE]
GSM1891829 LNCaP Epithelium Prostate H3K4me2 [Search on ENCODE]
GSM2370640 None resting Blood H3K4me1 [Search on ENCODE]
GSM2058073 V410 None None H3K4me1 [Search on ENCODE]
GSM2058078 V457 None None H3K4me1 [Search on ENCODE]
GSM2058084 V852 None None H3K4me1 [Search on ENCODE]
GSM1846179 None Granulocyte Blood H3K4me2 [Search on ENCODE]
GSM2476260 MCF-7 None Breast H3K4me2 [Search on ENCODE]
GSM2476259 MCF-7 None Breast H3K4me2 [Search on ENCODE]
GSM2476258 MCF-7 None Breast H3K4me2 [Search on ENCODE]
GSM1907211 LNCaP Epithelium Prostate H3K4me3 [Search on ENCODE]
GSM772907 None None Stomach H3K4me1 [Search on ENCODE]
GSM773038 None None Cord blood H3K4me1 [Search on ENCODE]
GSM822391 MCF-7 Epithelium Breast H3K4me2 [Search on ENCODE]
GSM822392 MCF-7 Epithelium Breast H3K4me2 [Search on ENCODE]
GSM2476344 501-Mel melanoma None H3K4me1 [Search on ENCODE]
GSM2644054 None Hepatocyte None H3K4me1 [Search on ENCODE]
GSM2946722 Huh7 cancer cells Liver H3K4me3 [Search on ENCODE]
GSM2550198 None Endothelial Cell None H3K27ac [Search on ENCODE]
Contents
Description
  • Overlapped Record Details
An overlapped record means a match between VIS and 1 of 3 Cistrome factor (histone modification, transcription factor binding site and chromatin accessibility), more specifically, this match includes at least 1 overlap between this VIS and 1 Cistrome factor-related sample from 1 of 3 Cistrome factor data. So one VIS may have several overlaps with multiple Cistrome factor-related samples, the associated factor and overlap amount of samples could indicate that the virus integration site is a potentially functional DNA element.