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HIV VIS-Cistrome Factor Overlapped Record Details

This pages show details of Cistrome factor-ralated samples which overlapped this VIS.
The cistrome refers to "the set of cis-acting targets of a trans-acting factor on a genome-wide scale."


Location chr1: 67833836-67833837 (GRCh38)
GSMID or ENCODE Cell line Cell type Tissue type Factor
GSM525267 T98G None Brain EP300 [Search on ENCODE]
GSM894077 U87 None Brain MAX [Search on ENCODE]
GSM585590 SKNO-1 Myeloblast Bone Marrow ERG [Search on ENCODE]
GSM798393 None Epithelium Mammary Gland ESR1 [Search on ENCODE]
GSM1099033 MDA-MB-453 Epithelium Mammary Gland TCF7L2 [Search on ENCODE]
GSM1099031 MDA-MB-453 Epithelium Mammary Gland FOXA1 [Search on ENCODE]
GSM1099032 MDA-MB-453 Epithelium Mammary Gland TCF7L2 [Search on ENCODE]
GSM1099029 MDA-MB-453 Epithelium Mammary Gland MYC [Search on ENCODE]
GSM1099030 MDA-MB-453 Epithelium Mammary Gland AR [Search on ENCODE]
GSM929090 IMR90 Fibroblast Lung EP300 [Search on ENCODE]
GSM999793 T47D Epithelium Mammary Gland PR [Search on ENCODE]
GSM1195552 U87 None Brain BRD4 [Search on ENCODE]
GSM1195551 U87 None Brain BRD4 [Search on ENCODE]
GSM1055812 IMR90 Fibroblast Lung EP300 [Search on ENCODE]
GSM1180134 None iPSC None JARID2 [Search on ENCODE]
GSM1239073 HEK293 Epithelium Embryonic Kidney CREBBP [Search on ENCODE]
GSM1003479 H1 Embryonic Stem Cell Embryo KDM4A [Search on ENCODE]
GSM1003500 None Epithelium Mammary Gland H2AZ [Search on ENCODE]
GSM733760 None Myoblast Skeletal Muscle H2AZ [Search on ENCODE]
GSM1003613 IMR90 Fibroblast Lung MAZ [Search on ENCODE]
GSM935477 MCF-7 Epithelium Breast E2F1 [Search on ENCODE]
GSM803474 HCT-116 None Colon POLR2A [Search on ENCODE]
GSM1010846 HCT-116 None Colon EGR1 [Search on ENCODE]
GSM803522 T47D Epithelium Mammary Gland EP300 [Search on ENCODE]
GSM1122659 T47D Epithelium Mammary Gland KDM5B [Search on ENCODE]
GSM1122662 SUM185PE Epithelium Mammary Gland KDM5B [Search on ENCODE]
GSM1122664 SUM159PT Epithelium Mammary Gland KDM5B [Search on ENCODE]
GSM1122671 HCC2157 Epithelium Mammary Gland KDM5B [Search on ENCODE]
GSM1387027 None Keratinocyte Foreskin ZNF750 [Search on ENCODE]
GSM1442789 IMR90 Fibroblast Lung EP300 [Search on ENCODE]
GSM1462475 T47D Epithelium Mammary Gland HIF1A [Search on ENCODE]
GSM1463930 None Myoblast None MED1 [Search on ENCODE]
GSM1467734 None Embryonic Stem Cell Embryo TRIM28 [Search on ENCODE]
GSM1470013 MCF-7 Epithelium Breast EP300 [Search on ENCODE]
GSM1418968 IMR90 Fibroblast Lung POLR2A [Search on ENCODE]
GSM1443813 hMADS-3 Adipocyte Adipose KLF11 [Search on ENCODE]
GSM1443814 hMADS-3 Adipocyte Adipose KLF11 [Search on ENCODE]
GSM1443816 hMADS-3 Adipocyte Adipose KLF11 [Search on ENCODE]
GSM1480367 None Adipocyte None POLR2A [Search on ENCODE]
GSM1446924 None Keratinocyte None POLR2A [Search on ENCODE]
GSM1330728 MRC5 Fibroblast Lung POLR2A [Search on ENCODE]
GSM856791 786-O Epithelium Kidney ARNT [Search on ENCODE]
GSM1527033 CWR22Pc Epithelium Prostate AR [Search on ENCODE]
GSM1670709 HuCCT1 None None SMC1A [Search on ENCODE]
ENCSR223TAV_1 HEK293 Epithelium Embryonic Kidney PRDM10 [Search on ENCODE]
ENCSR223TAV_2 HEK293 Epithelium Embryonic Kidney PRDM10 [Search on ENCODE]
ENCSR481FEC_1 HEK293 Epithelium Embryonic Kidney ZBTB8A [Search on ENCODE]
ENCSR803JLV_1 HEK293 Epithelium Embryonic Kidney IKZF2 [Search on ENCODE]
ENCSR803JLV_2 HEK293 Epithelium Embryonic Kidney IKZF2 [Search on ENCODE]
GSM818008 IMR90 Fibroblast Lung H2AZ [Search on ENCODE]
ENCSR966ULI_2 HEK293 Epithelium Embryonic Kidney PATZ1 [Search on ENCODE]
GSM2026796 HEK293 Epithelium Embryonic Kidney SP2 [Search on ENCODE]
GSM2026875 HEK293 Epithelium Embryonic Kidney ZFP64 [Search on ENCODE]
GSM2026876 HEK293 Epithelium Embryonic Kidney ZFP64 [Search on ENCODE]
GSM2026802 HEK293 Epithelium Embryonic Kidney EGR3 [Search on ENCODE]
GSM1842703 SUM1315MO2 None None BRD4 [Search on ENCODE]
GSM1842697 HCC1395 None None BRD4 [Search on ENCODE]
GSM1937510 HEK293T Epithelium Embryonic Kidney TET2 [Search on ENCODE]
GSM1843413 C4-2 None Prostate POLR2A [Search on ENCODE]
GSM2103055 BEAS-2B Epithelium Lung NR3C1 [Search on ENCODE]
GSM2103054 BEAS-2B Epithelium Lung NR3C1 [Search on ENCODE]
GSM2103046 BEAS-2B Epithelium Lung NR3C1 [Search on ENCODE]
GSM2103045 BEAS-2B Epithelium Lung NR3C1 [Search on ENCODE]
GSM2103042 BEAS-2B Epithelium Lung NR3C1 [Search on ENCODE]
GSM2103041 BEAS-2B Epithelium Lung NR3C1 [Search on ENCODE]
GSM2112809 T47D None Breast PR [Search on ENCODE]
GSM2112798 T47D None Breast ESR1 [Search on ENCODE]
GSM2112797 T47D None Breast PR [Search on ENCODE]
GSM2140684 None Hematopoietic stem and progenitor cell None STAG1 [Search on ENCODE]
GSM1863068 293T None None TET2 [Search on ENCODE]
GSM2065879 HCT-116 Colon cancer cell Colon SP1 [Search on ENCODE]
GSM2065874 HCT-116 Colon cancer cell Colon SP1 [Search on ENCODE]
GSM2297331 HCT-116 Colon cancer cell Colon RAD21 [Search on ENCODE]
GSM2330600 SUM159PT Mammary carcinoma cell Breast BRD4 [Search on ENCODE]
GSM2330596 SUM159PT Mammary carcinoma cell Breast BRD4 [Search on ENCODE]
GSM2330592 SUM159PT Mammary carcinoma cell Breast BRD4 [Search on ENCODE]
GSM2330586 SUM159PT Mammary carcinoma cell Breast EP300 [Search on ENCODE]
GSM2330585 SUM159PT Mammary carcinoma cell Breast EP300 [Search on ENCODE]
GSM2330584 SUM159PT Mammary carcinoma cell Breast EP300 [Search on ENCODE]
GSM2330583 SUM159PT Mammary carcinoma cell Breast EP300 [Search on ENCODE]
GSM2330582 SUM159PT Mammary carcinoma cell Breast BRD4 [Search on ENCODE]
GSM2330581 SUM159PT Mammary carcinoma cell Breast BRD4 [Search on ENCODE]
GSM2212235 SEM B Lymphocyte None KDM2B [Search on ENCODE]
GSM2364545 SEM B Lymphocyte None AFF1 [Search on ENCODE]
GSM2364544 SEM B Lymphocyte None KMT2A [Search on ENCODE]
GSM2265647 None None Pontine BRD2 [Search on ENCODE]
GSM1499533 T778 None None MAZ [Search on ENCODE]
GSM2543161 U2OS None None ZBTB48 [Search on ENCODE]
GSM2543160 U2OS None None ZBTB48 [Search on ENCODE]
GSM2543159 U2OS None None ZBTB48 [Search on ENCODE]
GSM2543158 U2OS None None ZBTB48 [Search on ENCODE]
GSM2543153 HeLa None None ZBTB48 [Search on ENCODE]
GSM2543152 HeLa None None ZBTB48 [Search on ENCODE]
GSM2543151 HeLa None None ZBTB48 [Search on ENCODE]
GSM2543150 HeLa None None ZBTB48 [Search on ENCODE]
GSM2543149 HeLa None None ZBTB48 [Search on ENCODE]
GSM2543147 HeLa None None ZBTB48 [Search on ENCODE]
GSM2467219 MCF-7 None Mammary Gland H2AZ [Search on ENCODE]
GSM2467212 MCF-7 None Mammary Gland H2AZ [Search on ENCODE]
GSM1617374 None None Snap-frozen tissue CNOT3 [Search on ENCODE]
GSM2398967 None Macrophage None SP140 [Search on ENCODE]
GSM2741773 HCT-116 None Colon ZFX [Search on ENCODE]
GSM2741772 HCT-116 None Colon ZFX [Search on ENCODE]
GSM2741776 None None Kidney ZFX [Search on ENCODE]
GSM2677682 None Chondrocyte Cartilage HCFC1R1 [Search on ENCODE]
GSM2519942 None None Muscle NR3C1 [Search on ENCODE]
GSM2519945 None None Muscle NR3C1 [Search on ENCODE]
GSM2519944 None None Muscle NR3C1 [Search on ENCODE]
GSM2519947 None None Muscle NR3C1 [Search on ENCODE]
GSM2519949 None None Muscle NR3C1 [Search on ENCODE]
GSM2519948 None None Muscle NR3C1 [Search on ENCODE]
GSM2519961 None None Muscle KLF15 [Search on ENCODE]
GSM2670870 LTED None Breast ESR1 [Search on ENCODE]
GSM1981415 LNCaP Epithelium Prostate H2AZ [Search on ENCODE]
GSM2498494 breast triple negative tumor cell line BCSC1 None Breast KDM4A [Search on ENCODE]
GSM2467011 None None Kidney RUNX1 [Search on ENCODE]
GSM2394415 JHU-06 Endothelial Cell None JUN [Search on ENCODE]
GSM2278004 HCC70 Epithelium Breast STAT3 [Search on ENCODE]
GSM2274677 Jurkat T Lymphocyte Blood TET2 [Search on ENCODE]
GSM2333813 None Fibroblast None ATF3 [Search on ENCODE]
GSM2519950 None None Muscle KLF15 [Search on ENCODE]
GSM2519951 None None Muscle KLF15 [Search on ENCODE]
GSM2667597 HeLa Epithelium Cervix POLR2A [Search on ENCODE]
GSM2406727 MCF-7 Epithelium Breast AHR [Search on ENCODE]
GSM2406725 MCF-7 Epithelium Breast AHRR [Search on ENCODE]
GSM2670869 SUM44 None Breast ESR1 [Search on ENCODE]
GSM2467775 MCF-10A Epithelium Breast POLR2A [Search on ENCODE]
GSM831035 H1 Embryonic Stem Cell Embryo KDM4A [Search on ENCODE]
GSM2741769 C4-2B Epithelium Prostate ZFX [Search on ENCODE]
GSM2550258 None Fibroblast None EP300 [Search on ENCODE]
GSM2676806 J-Lat A72 None None SMARCA4 [Search on ENCODE]
GSM889427 MDA-MB-453 Epithelium Mammary Gland TFAP2C [Search on ENCODE]
Contents
Description
  • Overlapped Record Details
An overlapped record means a match between VIS and 1 of 3 Cistrome factor (histone modification, transcription factor binding site and chromatin accessibility), more specifically, this match includes at least 1 overlap between this VIS and 1 Cistrome factor-related sample from 1 of 3 Cistrome factor data. So one VIS may have several overlaps with multiple Cistrome factor-related samples, the associated factor and overlap amount of samples could indicate that the virus integration site is a potentially functional DNA element.