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HIV VIS-Cistrome Factor Overlapped Record Details

This pages show details of Cistrome factor-ralated samples which overlapped this VIS.
The cistrome refers to "the set of cis-acting targets of a trans-acting factor on a genome-wide scale."


Location chr1: 117535027-117535028 (GRCh38)
GSMID or ENCODE Cell line Cell type Tissue type Factor
GSM701516 None T Lymphocyte Blood DNase [Search on ENCODE]
GSM701499 None T Lymphocyte Blood DNase [Search on ENCODE]
GSM701493 None B Lymphocyte Spleen DNase [Search on ENCODE]
GSM701492 None B Lymphocyte Spleen DNase [Search on ENCODE]
GSM701491 None T Lymphocyte Blood DNase [Search on ENCODE]
GSM701488 None T Lymphocyte Blood DNase [Search on ENCODE]
GSM665820 None Natural Killer Cell Blood DNase [Search on ENCODE]
GSM665813 None T Lymphocyte Blood DNase [Search on ENCODE]
GSM665812 None T Lymphocyte Blood DNase [Search on ENCODE]
GSM595917 None Haematopoietic Progenitor Cell Blood DNase [Search on ENCODE]
GSM623517 NHEK Keratinocyte Skin DNase [Search on ENCODE]
GSM623514 HeLa-S3 Epithelium Cervix DNase [Search on ENCODE]
GSM1036259 None T Lymphocyte Blood DNase [Search on ENCODE]
GSM778713 GM19159 Lymphoblastoid None DNase [Search on ENCODE]
GSM817200 None None Fetal Muscle Back DNase [Search on ENCODE]
GSM817206 None None Fetal Muscle Leg DNase [Search on ENCODE]
GSM1059531 None None Fetal Muscle Back DNase [Search on ENCODE]
GSM1059534 None None Fetal Muscle Trunk DNase [Search on ENCODE]
GSM1059533 None None Fetal Muscle Leg DNase [Search on ENCODE]
GSM778698 GM19114 Lymphoblastoid None DNase [Search on ENCODE]
GSM778663 GM18486 Lymphoblastoid Blood DNase [Search on ENCODE]
GSM778685 GM18861 Lymphoblastoid None DNase [Search on ENCODE]
GSM778682 GM18856 Lymphoblastoid None DNase [Search on ENCODE]
GSM778676 GM18519 Lymphoblastoid None DNase [Search on ENCODE]
GSM646568 GM06990 B Lymphocyte Blood DNase [Search on ENCODE]
GSM646564 None Fibroblast Skin DNase [Search on ENCODE]
GSM646565 None Epithelium None DNase [Search on ENCODE]
GSM646561 None Epithelium Mammary Gland DNase [Search on ENCODE]
GSM646569 None Th1 None DNase [Search on ENCODE]
GSM646567 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
GSM646570 None Endothelial Cell Blood DNase [Search on ENCODE]
GSM909314 H1 Embryonic Stem Cell Embryo DNase [Search on ENCODE]
GSM909312 None Fibroblast Foreskin DNase [Search on ENCODE]
GSM931362 WI-38 Fibroblast Lung DNase [Search on ENCODE]
GSM1102737 None T Lymphocyte Cord blood DNase [Search on ENCODE]
GSM878645 None None Fetal Skin Biceps Left DNase [Search on ENCODE]
GSM878620 None None Fetal Muscle Arm DNase [Search on ENCODE]
GSM878644 None None Fetal Skin Biceps Left DNase [Search on ENCODE]
GSM878636 None None Fetal Skin Abdomen DNase [Search on ENCODE]
GSM878623 None Fibroblast Fetal Skin Back DNase [Search on ENCODE]
GSM878624 None Fibroblast Fetal Skin Back DNase [Search on ENCODE]
GSM878648 None None Fetal Skin Quadriceps Left DNase [Search on ENCODE]
GSM878639 None None Fetal Muscle Back DNase [Search on ENCODE]
GSM878642 None None Fetal Skin Biceps Right DNase [Search on ENCODE]
GSM878647 None None Fetal Skin Quadriceps Right DNase [Search on ENCODE]
GSM878633 None Fibroblast Fetal Skin Scalp DNase [Search on ENCODE]
GSM878640 None None Fetal Skin Upper Back DNase [Search on ENCODE]
GSM878646 None None Fetal Skin Quadriceps Right DNase [Search on ENCODE]
GSM878641 None None Fetal Skin Upper Back DNase [Search on ENCODE]
GSM878643 None None Fetal Skin Biceps Right DNase [Search on ENCODE]
GSM878634 None Fibroblast Fetal Skin Scalp DNase [Search on ENCODE]
GSM878612 H9 Embryonic Stem Cell Embryo DNase [Search on ENCODE]
GSM816643 HeLa-S3 Epithelium Cervix DNase [Search on ENCODE]
GSM816657 GM12892 Lymphoblastoid Blood DNase [Search on ENCODE]
GSM816665 GM12878 B Lymphocyte Blood DNase [Search on ENCODE]
GSM816659 GM19239 Lymphoblastoid Blood DNase [Search on ENCODE]
GSM816656 GM12891 Lymphoblastoid Blood DNase [Search on ENCODE]
GSM816633 HeLa-S3 Epithelium Cervix DNase [Search on ENCODE]
GSM1027351 None None Fetal Thymus DNase [Search on ENCODE]
GSM817179 None None Fetal Muscle Leg DNase [Search on ENCODE]
GSM817174 None Epithelium Fetal Lung Right DNase [Search on ENCODE]
GSM1014539 LHCN-M2 Myoblast Skeletal Muscle DNase [Search on ENCODE]
GSM1014523 None T Lymphocyte Blood DNase [Search on ENCODE]
GSM1014541 None Th17 None DNase [Search on ENCODE]
GSM1014514 None Myoblast Skeletal Muscle DNase [Search on ENCODE]
GSM1014528 None Endothelial Cell Umbilical Vein DNase [Search on ENCODE]
GSM1014518 None Embryonic Fibroblast Heart DNase [Search on ENCODE]
GSM1014532 None Endothelial Cell Blood DNase [Search on ENCODE]
GSM1014535 RPMI-7951 Melanoma Cell Skin DNase [Search on ENCODE]
GSM1014537 None T Lymphocyte Blood DNase [Search on ENCODE]
GSM1014508 HA-sp Astrocyte Spinal Cord DNase [Search on ENCODE]
GSM1014526 GM12865 B Lymphocyte Blood DNase [Search on ENCODE]
GSM1014527 AG10803 Fibroblast Skin DNase [Search on ENCODE]
GSM1014524 LHCN-M2 Myoblast Skeletal Muscle DNase [Search on ENCODE]
GSM1014515 None Myocyte Heart DNase [Search on ENCODE]
GSM1014525 None B Lymphocyte Blood DNase [Search on ENCODE]
GSM1014530 None Fibroblast Heart DNase [Search on ENCODE]
GSM1014531 None Embryonic Fibroblast Foreskin DNase [Search on ENCODE]
GSM1014522 None Th2 None DNase [Search on ENCODE]
GSM1014521 None Th2 None DNase [Search on ENCODE]
GSM1014513 NB4 Promyelocytic cell Blood DNase [Search on ENCODE]
GSM1014540 None Th1 None DNase [Search on ENCODE]
GSM1014538 M059J Glial Cell Brain DNase [Search on ENCODE]
GSM1058790 None T Lymphocyte Blood DNase [Search on ENCODE]
GSM723024 IMR90 Fibroblast Lung DNase [Search on ENCODE]
GSM774241 None Fibroblast Foreskin DNase [Search on ENCODE]
GSM774234 None None Fetal Muscle Arm DNase [Search on ENCODE]
GSM774240 None Fibroblast Foreskin DNase [Search on ENCODE]
GSM774239 None None Fetal Muscle Arm DNase [Search on ENCODE]
GSM849031 None Fibroblast Pulmonary Artery DNase [Search on ENCODE]
GSM849029 None Fibroblast Umbilical Vein DNase [Search on ENCODE]
GSM849028 None Fibroblast Lung DNase [Search on ENCODE]
GSM1220604 None B Lymphocyte Spleen DNase [Search on ENCODE]
GSM1220605 None Fibroblast Fetal Skin Back DNase [Search on ENCODE]
GSM1220606 None Fibroblast Fetal Skin Scalp DNase [Search on ENCODE]
GSM1220607 None None Fetal Skin Abdomen DNase [Search on ENCODE]
GSM1220608 None None Fetal Skin Upper Back DNase [Search on ENCODE]
GSM1220609 None None Fetal Skin Biceps Right DNase [Search on ENCODE]
GSM1220610 None None Fetal Skin Quadriceps Right DNase [Search on ENCODE]
GSM1224668 HCT-116 None Colon DNase [Search on ENCODE]
GSM1255270 LNCaP Epithelium Prostate DNase [Search on ENCODE]
GSM1255273 LNCaP Epithelium Prostate DNase [Search on ENCODE]
GSM1255278 LNCaP Epithelium Prostate DNase [Search on ENCODE]
GSM1255281 MCF-7 Epithelium Breast DNase [Search on ENCODE]
GSM1255283 LNCaP Epithelium Prostate DNase [Search on ENCODE]
GSM1338307 None Fibroblast None DNase [Search on ENCODE]
GSM1338308 None Fibroblast None DNase [Search on ENCODE]
GSM1338309 None Fibroblast None DNase [Search on ENCODE]
GSM1338310 None Fibroblast None DNase [Search on ENCODE]
GSM1024765 None B Lymphocyte Blood DNase [Search on ENCODE]
GSM1024766 None B Lymphocyte Blood DNase [Search on ENCODE]
GSM1024776 GM04504 Fibroblast Skin DNase [Search on ENCODE]
GSM736496 GM12878 B Lymphocyte Blood DNase [Search on ENCODE]
GSM736620 GM12878 B Lymphocyte Blood DNase [Search on ENCODE]
GSM736494 None Embryonic Fibroblast Heart DNase [Search on ENCODE]
GSM736515 None Fibroblast Eye DNase [Search on ENCODE]
GSM736541 None Epithelium Mammary Gland DNase [Search on ENCODE]
GSM736628 None Epithelium Mammary Gland DNase [Search on ENCODE]
GSM736632 None Fibroblast Periodontal Ligament DNase [Search on ENCODE]
GSM736560 None Myoblast Skeletal Muscle DNase [Search on ENCODE]
GSM736553 None Myoblast Skeletal Muscle DNase [Search on ENCODE]
GSM1024788 None Myoblast Skeletal Muscle DNase [Search on ENCODE]
GSM1024787 LHCN-M2 Myoblast Skeletal Muscle DNase [Search on ENCODE]
GSM1024786 LHCN-M2 Myoblast Skeletal Muscle DNase [Search on ENCODE]
GSM736520 NHDF-Ad Fibroblast Skin DNase [Search on ENCODE]
GSM736567 NHDF-Ad Fibroblast Skin DNase [Search on ENCODE]
GSM736517 PANC-1 None Pancreas DNase [Search on ENCODE]
GSM736497 SKMC Myoblast Skeletal Muscle DNase [Search on ENCODE]
GSM736593 SKMC Myoblast Skeletal Muscle DNase [Search on ENCODE]
GSM1024753 None Th1 Blood DNase [Search on ENCODE]
GSM1024792 None Th2 Blood DNase [Search on ENCODE]
GSM736502 None Th2 Blood DNase [Search on ENCODE]
GSM1024739 None Th2 Blood DNase [Search on ENCODE]
GSM1024741 None T Lymphocyte Blood DNase [Search on ENCODE]
GSM1581822 None Myeloid Cell None DNase [Search on ENCODE]
GSM1621352 GM12878 B Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM2048321 None Th17 Tonsil ATAC-seq [Search on ENCODE]
GSM2113544 BE2-C Neuroblast Brain ATAC-seq [Search on ENCODE]
GSM1662258 None Fibroblast None ATAC-seq [Search on ENCODE]
GSM1662259 None Fibroblast None ATAC-seq [Search on ENCODE]
GSM2257299 H7 Embryonic Stem Cell Embryo ATAC-seq [Search on ENCODE]
GSM1939574 None Erythroblast None ATAC-seq [Search on ENCODE]
GSM1855976 MDA-MB-231 Epithelium Breast ATAC-seq [Search on ENCODE]
GSM1855979 MDA-MB-231 Epithelium Breast ATAC-seq [Search on ENCODE]
GSM1855980 MDA-MB-231 Epithelium Breast ATAC-seq [Search on ENCODE]
GSM1855981 MDA-MB-231 Epithelium Breast ATAC-seq [Search on ENCODE]
GSM1832754 None B Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM1832755 None B Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM1832756 None B Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM1832757 None B Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM1832758 None B Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM1832759 None B Lymphocyte Blood ATAC-seq [Search on ENCODE]
ENCSR083STA_1 MG-63 Fibroblast Bone DNase [Search on ENCODE]
ENCSR097BWW_1 None None Kidney DNase [Search on ENCODE]
ENCSR782XFY_1 None None Eye DNase [Search on ENCODE]
ENCSR782XFY_2 None None Eye DNase [Search on ENCODE]
ENCSR257BGZ_2 ACHN None Kidney DNase [Search on ENCODE]
ENCSR346JWH_1 A673 Polygonal Muscle DNase [Search on ENCODE]
ENCSR346JWH_2 A673 Polygonal Muscle DNase [Search on ENCODE]
ENCSR405TXU_1 None Adipocyte None DNase [Search on ENCODE]
ENCSR426IEA_1 KBM-7 Myeloblast Blood DNase [Search on ENCODE]
ENCSR512CWR None None Umbilical Cord DNase [Search on ENCODE]
ENCSR559WMK None None Tongue DNase [Search on ENCODE]
ENCSR620WAR_2 SJSA-1 Fibroblast Bone DNase [Search on ENCODE]
ENCSR940NLN_1 PC-9 Lung Cancer Cell Lung DNase [Search on ENCODE]
ENCSR224IYD_2 None None Medulla Oblongata DNase [Search on ENCODE]
ENCSR489NAM_1 OCI-Ly7 B cell lymphoma Blood DNase [Search on ENCODE]
ENCSR489NAM_2 OCI-Ly7 B cell lymphoma Blood DNase [Search on ENCODE]
ENCSR217TAW_2 None Fibroblast None DNase [Search on ENCODE]
ENCSR636VCX_1 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR374YBC_1 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR000FFJ SJCRH30 Fibroblast Muscle DNase [Search on ENCODE]
ENCSR627NIF_2 None None Lung DNase [Search on ENCODE]
ENCSR017OZH_1 None Embryonic Stem Cell None DNase [Search on ENCODE]
ENCSR095GWE_2 None None Stomach DNase [Search on ENCODE]
ENCSR215FCQ_1 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR229PFU_1 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR474GZQ_3 None None Retina DNase [Search on ENCODE]
ENCSR522WLH_1 None None Pancreas DNase [Search on ENCODE]
ENCSR560CCF_2 K562 Erythroblast Bone Marrow DNase [Search on ENCODE]
ENCSR621ENC_1 None None Retina DNase [Search on ENCODE]
ENCSR664PKM_1 None None Heart DNase [Search on ENCODE]
ENCSR691MQJ_3 EL None None DNase [Search on ENCODE]
ENCSR754LIN_2 None Embryonic Stem Cell None DNase [Search on ENCODE]
ENCSR768OLL_1 None None Kidney DNase [Search on ENCODE]
ENCSR943SYS_1 None Embryonic Stem Cell None DNase [Search on ENCODE]
GSM2243039 None Plasmacytoid dendritic cell None ATAC-seq [Search on ENCODE]
GSM2243037 None Plasmacytoid dendritic cell None ATAC-seq [Search on ENCODE]
GSM2174881 BJ Fibroblast Skin ATAC-seq [Search on ENCODE]
GSM2174880 BJ Fibroblast Skin ATAC-seq [Search on ENCODE]
GSM2174878 BJ Fibroblast Skin ATAC-seq [Search on ENCODE]
GSM2174876 BJ Fibroblast Skin ATAC-seq [Search on ENCODE]
GSM2544222 THP-1 Macrophage None ATAC-seq [Search on ENCODE]
GSM2098984 HFF Fibroblast Foreskin ATAC-seq [Search on ENCODE]
GSM2241147 T47D Epithelium Mammary Gland ATAC-seq [Search on ENCODE]
GSM2306502 None Treg cell None ATAC-seq [Search on ENCODE]
GSM2285662 None T Lymphocyte None ATAC-seq [Search on ENCODE]
GSM2285650 None T Lymphocyte None ATAC-seq [Search on ENCODE]
GSM2285649 None T Lymphocyte None ATAC-seq [Search on ENCODE]
GSM2285643 None T Lymphocyte None ATAC-seq [Search on ENCODE]
GSM2285642 None T Lymphocyte None ATAC-seq [Search on ENCODE]
GSM2285590 None T Lymphocyte None ATAC-seq [Search on ENCODE]
GSM2285574 None T Lymphocyte None ATAC-seq [Search on ENCODE]
GSM2386577 H1 Embryonic Stem Cell Embryo ATAC-seq [Search on ENCODE]
GSM2386576 H1 Embryonic Stem Cell Embryo ATAC-seq [Search on ENCODE]
GSM2575290 WM989 melanoma None ATAC-seq [Search on ENCODE]
GSM2365854 None Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM2365853 None Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM2365851 None Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM2365849 None Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM2365848 None Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM2365846 None Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM489280 GM12891 Lymphoblastoid Blood DNase [Search on ENCODE]
GSM489282 GM12892 Lymphoblastoid Blood DNase [Search on ENCODE]
GSM489283 GM12892 Lymphoblastoid Blood DNase [Search on ENCODE]
GSM489289 GM19239 Lymphoblastoid Blood DNase [Search on ENCODE]
GSM816635 NHEK Keratinocyte Skin DNase [Search on ENCODE]
GSM2242136 MDA-MB-231 Epithelium Breast DNase [Search on ENCODE]
GSM1876030 None None Artery ATAC-seq [Search on ENCODE]
GSM1876024 None Smooth Muscle Cell Coronary artery smooth muscle ATAC-seq [Search on ENCODE]
GSM1876023 None Smooth Muscle Cell Coronary artery smooth muscle ATAC-seq [Search on ENCODE]
GSM1876022 None Smooth Muscle Cell Coronary artery smooth muscle ATAC-seq [Search on ENCODE]
GSM1946434 hFOB Embryonic Stem Cell Bone DNase [Search on ENCODE]
GSM2035704 JHU-06 EB None ATAC-seq [Search on ENCODE]
GSM1858672 ZR-75-1 Embryonic Stem Cell Breast DNase [Search on ENCODE]
GSM2411164 Jurkat T Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM2411165 Jurkat T Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM2411166 Jurkat T Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM2411167 Jurkat T Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM2411161 Jurkat T Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM2411162 Jurkat T Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM2411163 Jurkat T Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM2719729 HCT-116 None Colon ATAC-seq [Search on ENCODE]
GSM2898818 None Stem cell None ATAC-seq [Search on ENCODE]
GSM2401443 BJ Fibroblast Skin ATAC-seq [Search on ENCODE]
GSM2679870 None Monocyte Blood ATAC-seq [Search on ENCODE]
GSM2722102 GM02171 Fibroblast None ATAC-seq [Search on ENCODE]
GSM2898783 None Stem cell None ATAC-seq [Search on ENCODE]
GSM2898787 None Stem cell None ATAC-seq [Search on ENCODE]
GSM2714245 MCF-7 Epithelium Breast ATAC-seq [Search on ENCODE]
GSM2898848 None Cardiomyocyte None ATAC-seq [Search on ENCODE]
GSM2898847 None Cardiomyocyte None ATAC-seq [Search on ENCODE]
GSM2411159 Jurkat T Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM2411158 Jurkat T Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM2898829 None Stem cell None ATAC-seq [Search on ENCODE]
GSM2898820 None Stem cell None ATAC-seq [Search on ENCODE]
GSM2898842 None Cardiomyocyte None ATAC-seq [Search on ENCODE]
GSM2898805 None Stem cell None ATAC-seq [Search on ENCODE]
GSM2898798 None Stem cell None ATAC-seq [Search on ENCODE]
GSM2898863 LCL Lymphoblastoid Blood ATAC-seq [Search on ENCODE]
GSM2898869 LCL Lymphoblastoid Blood ATAC-seq [Search on ENCODE]
GSM2714247 MCF-7 Epithelium Breast ATAC-seq [Search on ENCODE]
GSM2898857 LCL Lymphoblastoid Blood ATAC-seq [Search on ENCODE]
Contents
Description
  • Overlapped Record Details
An overlapped record means a match between VIS and 1 of 3 Cistrome factor (histone modification, transcription factor binding site and chromatin accessibility), more specifically, this match includes at least 1 overlap between this VIS and 1 Cistrome factor-related sample from 1 of 3 Cistrome factor data. So one VIS may have several overlaps with multiple Cistrome factor-related samples, the associated factor and overlap amount of samples could indicate that the virus integration site is a potentially functional DNA element.