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HIV VIS-Cistrome Factor Overlapped Record Details

This pages show details of Cistrome factor-ralated samples which overlapped this VIS.
The cistrome refers to "the set of cis-acting targets of a trans-acting factor on a genome-wide scale."


Location chr1: 151680621-151680622 (GRCh38)
GSMID or ENCODE Cell line Cell type Tissue type Factor
GSM623515 None Endothelial Cell Umbilical Vein DNase [Search on ENCODE]
GSM623517 NHEK Keratinocyte Skin DNase [Search on ENCODE]
GSM646565 None Epithelium None DNase [Search on ENCODE]
GSM646560 None Epithelium Amnion DNase [Search on ENCODE]
GSM646561 None Epithelium Mammary Gland DNase [Search on ENCODE]
GSM646570 None Endothelial Cell Blood DNase [Search on ENCODE]
GSM909314 H1 Embryonic Stem Cell Embryo DNase [Search on ENCODE]
GSM909312 None Fibroblast Foreskin DNase [Search on ENCODE]
GSM931361 WI-38 Fibroblast Lung DNase [Search on ENCODE]
GSM878623 None Fibroblast Fetal Skin Back DNase [Search on ENCODE]
GSM816665 GM12878 B Lymphocyte Blood DNase [Search on ENCODE]
GSM816646 None Endothelial Cell Umbilical Vein DNase [Search on ENCODE]
GSM906380 H1 Embryonic Stem Cell Embryo DNase [Search on ENCODE]
GSM1027325 None None Stomach DNase [Search on ENCODE]
GSM1027350 None Keratinocyte Foreskin DNase [Search on ENCODE]
GSM817195 None Keratinocyte Foreskin DNase [Search on ENCODE]
GSM817194 None Keratinocyte Foreskin DNase [Search on ENCODE]
GSM817197 None Keratinocyte Foreskin DNase [Search on ENCODE]
GSM1014510 None Fibroblast Connective Tissue DNase [Search on ENCODE]
GSM1014528 None Endothelial Cell Umbilical Vein DNase [Search on ENCODE]
GSM1014518 None Embryonic Fibroblast Heart DNase [Search on ENCODE]
GSM1014532 None Endothelial Cell Blood DNase [Search on ENCODE]
GSM1014508 HA-sp Astrocyte Spinal Cord DNase [Search on ENCODE]
GSM1014511 None Epithelium Esophagus DNase [Search on ENCODE]
GSM1014519 None Endothelial Cell Blood DNase [Search on ENCODE]
GSM1014526 GM12865 B Lymphocyte Blood DNase [Search on ENCODE]
GSM1014524 LHCN-M2 Myoblast Skeletal Muscle DNase [Search on ENCODE]
GSM1014515 None Myocyte Heart DNase [Search on ENCODE]
GSM1014517 A549 Epithelium Lung DNase [Search on ENCODE]
GSM1014531 None Embryonic Fibroblast Foreskin DNase [Search on ENCODE]
GSM1014520 None Epithelium None DNase [Search on ENCODE]
GSM1014538 M059J Glial Cell Brain DNase [Search on ENCODE]
GSM774240 None Fibroblast Foreskin DNase [Search on ENCODE]
GSM849029 None Fibroblast Umbilical Vein DNase [Search on ENCODE]
GSM849025 None Epithelium Lung DNase [Search on ENCODE]
GSM849027 None Cortex Kidney DNase [Search on ENCODE]
GSM849026 None Astrocyte Brain DNase [Search on ENCODE]
GSM849028 None Fibroblast Lung DNase [Search on ENCODE]
GSM1220605 None Fibroblast Fetal Skin Back DNase [Search on ENCODE]
GSM1338307 None Fibroblast None DNase [Search on ENCODE]
GSM1338309 None Fibroblast None DNase [Search on ENCODE]
GSM1338310 None Fibroblast None DNase [Search on ENCODE]
GSM736590 AG04449 Fibroblast Skin DNase [Search on ENCODE]
GSM736606 None Epithelium Amnion DNase [Search on ENCODE]
GSM736631 None Epithelium Amnion DNase [Search on ENCODE]
GSM736509 None Endothelial Cell Umbilical Vein DNase [Search on ENCODE]
GSM736494 None Embryonic Fibroblast Heart DNase [Search on ENCODE]
GSM736510 HeLa-S3 Epithelium Cervix DNase [Search on ENCODE]
GSM736564 HeLa-S3 Epithelium Cervix DNase [Search on ENCODE]
GSM736634 None Epithelium Mammary Gland DNase [Search on ENCODE]
GSM736552 None Epithelium Mammary Gland DNase [Search on ENCODE]
GSM736523 None Endothelial Cell Umbilical Vein DNase [Search on ENCODE]
GSM736521 None Endothelial Cell Umbilical Vein DNase [Search on ENCODE]
GSM736577 None Endothelial Cell Umbilical Vein DNase [Search on ENCODE]
GSM736542 None Endothelial Cell Umbilical Vein DNase [Search on ENCODE]
GSM736550 None Epithelium None DNase [Search on ENCODE]
GSM736621 None Epithelium None DNase [Search on ENCODE]
GSM736549 None Cortex Kidney DNase [Search on ENCODE]
GSM736557 None Cortex Kidney DNase [Search on ENCODE]
GSM736548 HRE Epithelium None DNase [Search on ENCODE]
GSM736527 HRE Epithelium None DNase [Search on ENCODE]
GSM736618 None Endothelial Cell Kidney DNase [Search on ENCODE]
GSM736499 None Endothelial Cell Kidney DNase [Search on ENCODE]
GSM1024773 M059J Glial Cell Brain DNase [Search on ENCODE]
GSM1024794 M059J Glial Cell Brain DNase [Search on ENCODE]
GSM1024767 MCF-7 Epithelium Breast DNase [Search on ENCODE]
GSM1024783 MCF-7 Epithelium Breast DNase [Search on ENCODE]
GSM736612 NHLF Fibroblast Lung DNase [Search on ENCODE]
GSM736517 PANC-1 None Pancreas DNase [Search on ENCODE]
GSM736539 RPTEC Epithelium Kidney DNase [Search on ENCODE]
GSM736608 SAEC Epithelium Lung DNase [Search on ENCODE]
GSM736617 SAEC Epithelium Lung DNase [Search on ENCODE]
GSM763533 HeLa Epithelium Cervix DNase [Search on ENCODE]
GSM1645709 None Keratinocyte None ATAC-seq [Search on ENCODE]
GSM1662258 None Fibroblast None ATAC-seq [Search on ENCODE]
GSM1662259 None Fibroblast None ATAC-seq [Search on ENCODE]
GSM1662260 None Fibroblast None ATAC-seq [Search on ENCODE]
GSM1662261 None Fibroblast None ATAC-seq [Search on ENCODE]
GSM1855976 MDA-MB-231 Epithelium Breast ATAC-seq [Search on ENCODE]
GSM1855977 MDA-MB-231 Epithelium Breast ATAC-seq [Search on ENCODE]
GSM1855978 MDA-MB-231 Epithelium Breast ATAC-seq [Search on ENCODE]
GSM1855979 MDA-MB-231 Epithelium Breast ATAC-seq [Search on ENCODE]
GSM1855980 MDA-MB-231 Epithelium Breast ATAC-seq [Search on ENCODE]
GSM1855981 MDA-MB-231 Epithelium Breast ATAC-seq [Search on ENCODE]
GSM1855982 MDA-MB-231 Epithelium Breast ATAC-seq [Search on ENCODE]
GSM1855983 MDA-MB-231 Epithelium Breast ATAC-seq [Search on ENCODE]
GSM1855984 MDA-MB-231 Epithelium Breast ATAC-seq [Search on ENCODE]
GSM1662255 None Epithelium Corneal Epithelium ATAC-seq [Search on ENCODE]
GSM1662257 None Epithelium Corneal Epithelium ATAC-seq [Search on ENCODE]
ENCSR083STA_1 MG-63 Fibroblast Bone DNase [Search on ENCODE]
ENCSR240TPI_1 BJ Fibroblast Skin DNase [Search on ENCODE]
ENCSR257BGZ_1 ACHN None Kidney DNase [Search on ENCODE]
ENCSR257BGZ_2 ACHN None Kidney DNase [Search on ENCODE]
ENCSR346IHH_1 Daoy Polygonal Cerebellum DNase [Search on ENCODE]
ENCSR405TXU_2 None Adipocyte None DNase [Search on ENCODE]
ENCSR548MMD_1 BJ Fibroblast Skin DNase [Search on ENCODE]
ENCSR620WAR_2 SJSA-1 Fibroblast Bone DNase [Search on ENCODE]
ENCSR814KRX_1 HT29 None Colon DNase [Search on ENCODE]
ENCSR814KRX_2 HT29 None Colon DNase [Search on ENCODE]
ENCSR932KWJ_2 A-172 Glial Cell Brain DNase [Search on ENCODE]
ENCSR217TAW_1 None Fibroblast None DNase [Search on ENCODE]
ENCSR217TAW_2 None Fibroblast None DNase [Search on ENCODE]
ENCSR000FDI_2 HT1080 None Connective Tissue DNase [Search on ENCODE]
ENCSR691MQJ_1 EL None None DNase [Search on ENCODE]
ENCSR691MQJ_3 EL None None DNase [Search on ENCODE]
GSM1972151 HT1080 None Connective Tissue ATAC-seq [Search on ENCODE]
GSM1972149 HT1080 None Connective Tissue ATAC-seq [Search on ENCODE]
GSM2174882 BJ Fibroblast Skin ATAC-seq [Search on ENCODE]
GSM2174881 BJ Fibroblast Skin ATAC-seq [Search on ENCODE]
GSM2174880 BJ Fibroblast Skin ATAC-seq [Search on ENCODE]
GSM2174879 BJ Fibroblast Skin ATAC-seq [Search on ENCODE]
GSM2174878 BJ Fibroblast Skin ATAC-seq [Search on ENCODE]
GSM2174877 BJ Fibroblast Skin ATAC-seq [Search on ENCODE]
GSM2174876 BJ Fibroblast Skin ATAC-seq [Search on ENCODE]
GSM2174875 BJ Fibroblast Skin ATAC-seq [Search on ENCODE]
GSM2098979 HFF Fibroblast Foreskin ATAC-seq [Search on ENCODE]
GSM2241148 T47D Epithelium Mammary Gland ATAC-seq [Search on ENCODE]
GSM2241147 T47D Epithelium Mammary Gland ATAC-seq [Search on ENCODE]
GSM816627 MCF-7 Epithelium Breast DNase [Search on ENCODE]
GSM816635 NHEK Keratinocyte Skin DNase [Search on ENCODE]
GSM2214071 7250 Fibroblast None DNase [Search on ENCODE]
GSM2242135 MDA-MB-231 Epithelium Breast DNase [Search on ENCODE]
GSM2242136 MDA-MB-231 Epithelium Breast DNase [Search on ENCODE]
GSM1876025 None Smooth Muscle Cell Coronary artery smooth muscle ATAC-seq [Search on ENCODE]
GSM1876024 None Smooth Muscle Cell Coronary artery smooth muscle ATAC-seq [Search on ENCODE]
GSM1876027 None Smooth Muscle Cell Coronary artery smooth muscle ATAC-seq [Search on ENCODE]
GSM1876026 None Smooth Muscle Cell Coronary artery smooth muscle ATAC-seq [Search on ENCODE]
GSM1876021 None Smooth Muscle Cell Coronary artery smooth muscle ATAC-seq [Search on ENCODE]
GSM1876023 None Smooth Muscle Cell Coronary artery smooth muscle ATAC-seq [Search on ENCODE]
GSM1876022 None Smooth Muscle Cell Coronary artery smooth muscle ATAC-seq [Search on ENCODE]
GSM1876028 None Smooth Muscle Cell Coronary artery smooth muscle ATAC-seq [Search on ENCODE]
GSM2401442 BJ Fibroblast Skin ATAC-seq [Search on ENCODE]
GSM2401444 BJ Fibroblast Skin ATAC-seq [Search on ENCODE]
GSM2401443 BJ Fibroblast Skin ATAC-seq [Search on ENCODE]
GSM2401445 BJ Fibroblast Skin ATAC-seq [Search on ENCODE]
GSM2977485 BJ Fibroblast Skin ATAC-seq [Search on ENCODE]
GSM2977486 BJ Fibroblast Skin ATAC-seq [Search on ENCODE]
GSM2977487 BJ Fibroblast Skin ATAC-seq [Search on ENCODE]
GSM2430668 BJ Fibroblast Skin ATAC-seq [Search on ENCODE]
GSM2430669 BJ Fibroblast Skin ATAC-seq [Search on ENCODE]
GSM2676284 MCF-10A Epithelium Breast DNase [Search on ENCODE]
GSM2714246 MCF-7 Epithelium Breast ATAC-seq [Search on ENCODE]
GSM2714244 MCF-7 Epithelium Breast ATAC-seq [Search on ENCODE]
GSM2898847 None Cardiomyocyte None ATAC-seq [Search on ENCODE]
GSM2898851 None Cardiomyocyte None ATAC-seq [Search on ENCODE]
GSM2692563 PC-9 Lung Cancer Cell Lung ATAC-seq [Search on ENCODE]
GSM2692562 PC-9 Lung Cancer Cell Lung ATAC-seq [Search on ENCODE]
GSM2430671 BJ Fibroblast Skin ATAC-seq [Search on ENCODE]
GSM2430672 BJ Fibroblast Skin ATAC-seq [Search on ENCODE]
GSM2218790 None Fibroblast Fetal Skin ATAC-seq [Search on ENCODE]
GSM2714247 MCF-7 Epithelium Breast ATAC-seq [Search on ENCODE]
Contents
Description
  • Overlapped Record Details
An overlapped record means a match between VIS and 1 of 3 Cistrome factor (histone modification, transcription factor binding site and chromatin accessibility), more specifically, this match includes at least 1 overlap between this VIS and 1 Cistrome factor-related sample from 1 of 3 Cistrome factor data. So one VIS may have several overlaps with multiple Cistrome factor-related samples, the associated factor and overlap amount of samples could indicate that the virus integration site is a potentially functional DNA element.