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HIV VIS-Cistrome Factor Overlapped Record Details

This pages show details of Cistrome factor-ralated samples which overlapped this VIS.
The cistrome refers to "the set of cis-acting targets of a trans-acting factor on a genome-wide scale."


Location chr1: 84090844-84090845 (GRCh38)
GSMID or ENCODE Cell line Cell type Tissue type Factor
GSM701516 None T Lymphocyte Blood DNase [Search on ENCODE]
GSM701489 None T Lymphocyte Blood DNase [Search on ENCODE]
GSM665835 None Epithelium Small Intestine DNase [Search on ENCODE]
GSM665826 None Epithelium Large Intestine DNase [Search on ENCODE]
GSM665825 None Epithelium Small Intestine DNase [Search on ENCODE]
GSM595917 None Haematopoietic Progenitor Cell Blood DNase [Search on ENCODE]
GSM530657 None Haematopoietic Progenitor Cell Blood DNase [Search on ENCODE]
GSM493384 None Haematopoietic Progenitor Cell Blood DNase [Search on ENCODE]
GSM1036259 None T Lymphocyte Blood DNase [Search on ENCODE]
GSM1036260 None Epithelium Fetal Large Intestine DNase [Search on ENCODE]
GSM1036373 None T Lymphocyte Blood DNase [Search on ENCODE]
GSM1036372 None Natural Killer Cell Blood DNase [Search on ENCODE]
GSM1059529 None None Cord blood DNase [Search on ENCODE]
GSM646569 None Th1 None DNase [Search on ENCODE]
GSM1027348 None Epithelium Fetal Small Intestine DNase [Search on ENCODE]
GSM1027327 None Epithelium Fetal Small Intestine DNase [Search on ENCODE]
GSM817187 None Epithelium Fetal Small Intestine DNase [Search on ENCODE]
GSM1014523 None T Lymphocyte Blood DNase [Search on ENCODE]
GSM1014537 None T Lymphocyte Blood DNase [Search on ENCODE]
GSM1014525 None B Lymphocyte Blood DNase [Search on ENCODE]
GSM1014522 None Th2 None DNase [Search on ENCODE]
GSM1014521 None Th2 None DNase [Search on ENCODE]
GSM1014540 None Th1 None DNase [Search on ENCODE]
GSM1014538 M059J Glial Cell Brain DNase [Search on ENCODE]
GSM1058790 None T Lymphocyte Blood DNase [Search on ENCODE]
GSM723022 None Haematopoietic Progenitor Cell Cord blood DNase [Search on ENCODE]
GSM774220 None Epithelium Fetal Large Intestine DNase [Search on ENCODE]
GSM774225 None Epithelium Fetal Small Intestine DNase [Search on ENCODE]
GSM774201 None T Lymphocyte Blood DNase [Search on ENCODE]
GSM774216 None Epithelium Fetal Small Intestine DNase [Search on ENCODE]
GSM774214 None Epithelium Fetal Large Intestine DNase [Search on ENCODE]
GSM849025 None Epithelium Lung DNase [Search on ENCODE]
GSM849027 None Cortex Kidney DNase [Search on ENCODE]
GSM1102739 None Epithelium Small Intestine DNase [Search on ENCODE]
GSM1220604 None B Lymphocyte Spleen DNase [Search on ENCODE]
GSM1224667 HCT-116 None Colon DNase [Search on ENCODE]
GSM1024765 None B Lymphocyte Blood DNase [Search on ENCODE]
GSM1024766 None B Lymphocyte Blood DNase [Search on ENCODE]
GSM1024770 None Haematopoietic Progenitor Cell Blood DNase [Search on ENCODE]
GSM1024789 None T Lymphocyte Blood DNase [Search on ENCODE]
GSM736519 PANC-1 None Pancreas DNase [Search on ENCODE]
GSM736517 PANC-1 None Pancreas DNase [Search on ENCODE]
GSM1024760 None Th1 Blood DNase [Search on ENCODE]
GSM1024752 None Th1 Blood DNase [Search on ENCODE]
GSM1024753 None Th1 Blood DNase [Search on ENCODE]
GSM1024792 None Th2 Blood DNase [Search on ENCODE]
GSM1024744 None T Lymphocyte Blood DNase [Search on ENCODE]
GSM1024741 None T Lymphocyte Blood DNase [Search on ENCODE]
GSM1581833 None Myeloid Cell None DNase [Search on ENCODE]
GSM1581834 None Myeloid Cell None DNase [Search on ENCODE]
GSM1621352 GM12878 B Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM1484789 None T Lymphocyte None ATAC-seq [Search on ENCODE]
GSM1484790 None T Lymphocyte None ATAC-seq [Search on ENCODE]
GSM1484791 None T Lymphocyte None ATAC-seq [Search on ENCODE]
GSM1484801 None T Lymphocyte None ATAC-seq [Search on ENCODE]
GSM1484805 None T Lymphocyte None ATAC-seq [Search on ENCODE]
GSM1484814 None T Lymphocyte None ATAC-seq [Search on ENCODE]
GSM1484815 None T Lymphocyte None ATAC-seq [Search on ENCODE]
GSM1484826 None T Lymphocyte None ATAC-seq [Search on ENCODE]
GSM1484829 None T Lymphocyte None ATAC-seq [Search on ENCODE]
GSM1484836 None T Lymphocyte None ATAC-seq [Search on ENCODE]
GSM1855977 MDA-MB-231 Epithelium Breast ATAC-seq [Search on ENCODE]
GSM1855981 MDA-MB-231 Epithelium Breast ATAC-seq [Search on ENCODE]
GSM1855982 MDA-MB-231 Epithelium Breast ATAC-seq [Search on ENCODE]
GSM1832753 None B Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM1832754 None B Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM1832755 None B Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM1832756 None B Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM1832757 None B Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM1832758 None B Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM1832759 None B Lymphocyte Blood ATAC-seq [Search on ENCODE]
ENCSR346IHH_1 Daoy Polygonal Cerebellum DNase [Search on ENCODE]
ENCSR346IHH_2 Daoy Polygonal Cerebellum DNase [Search on ENCODE]
GSM2243040 None Dendritic Cell None ATAC-seq [Search on ENCODE]
GSM2243039 None Plasmacytoid dendritic cell None ATAC-seq [Search on ENCODE]
GSM2243038 None Dendritic Cell None ATAC-seq [Search on ENCODE]
GSM2243037 None Plasmacytoid dendritic cell None ATAC-seq [Search on ENCODE]
GSM2243034 Gen2.2 Plasmacytoid dendritic cell None ATAC-seq [Search on ENCODE]
GSM2359981 None Macrophage None ATAC-seq [Search on ENCODE]
GSM2306500 None Th17 None ATAC-seq [Search on ENCODE]
GSM2306498 None Th2 None ATAC-seq [Search on ENCODE]
GSM2306497 None Th2 None ATAC-seq [Search on ENCODE]
GSM2306496 None Th2 None ATAC-seq [Search on ENCODE]
GSM2306494 None Th1 None ATAC-seq [Search on ENCODE]
GSM2306492 None T Lymphocyte None ATAC-seq [Search on ENCODE]
GSM2306491 None T Lymphocyte None ATAC-seq [Search on ENCODE]
GSM2306490 None T Lymphocyte None ATAC-seq [Search on ENCODE]
GSM2306489 None T Lymphocyte None ATAC-seq [Search on ENCODE]
GSM2285677 None T Lymphocyte None ATAC-seq [Search on ENCODE]
GSM2285676 None T Lymphocyte None ATAC-seq [Search on ENCODE]
GSM2285675 None T Lymphocyte None ATAC-seq [Search on ENCODE]
GSM2285661 None T Lymphocyte None ATAC-seq [Search on ENCODE]
GSM2285660 None T Lymphocyte None ATAC-seq [Search on ENCODE]
GSM2285656 None T Lymphocyte None ATAC-seq [Search on ENCODE]
GSM2285655 None T Lymphocyte None ATAC-seq [Search on ENCODE]
GSM2285654 None T Lymphocyte None ATAC-seq [Search on ENCODE]
GSM2285650 None T Lymphocyte None ATAC-seq [Search on ENCODE]
GSM2285649 None T Lymphocyte None ATAC-seq [Search on ENCODE]
GSM2285643 None T Lymphocyte None ATAC-seq [Search on ENCODE]
GSM2285642 None T Lymphocyte None ATAC-seq [Search on ENCODE]
GSM2285638 None T Lymphocyte None ATAC-seq [Search on ENCODE]
GSM2285631 None T Lymphocyte None ATAC-seq [Search on ENCODE]
GSM2285615 None T Lymphocyte None ATAC-seq [Search on ENCODE]
GSM2285614 None T Lymphocyte None ATAC-seq [Search on ENCODE]
GSM2285612 None T Lymphocyte None ATAC-seq [Search on ENCODE]
GSM2285599 None T Lymphocyte None ATAC-seq [Search on ENCODE]
GSM2285598 None T Lymphocyte None ATAC-seq [Search on ENCODE]
GSM2285594 None T Lymphocyte None ATAC-seq [Search on ENCODE]
GSM2285590 None T Lymphocyte None ATAC-seq [Search on ENCODE]
GSM2285586 None T Lymphocyte None ATAC-seq [Search on ENCODE]
GSM2285585 None T Lymphocyte None ATAC-seq [Search on ENCODE]
GSM2285584 None T Lymphocyte None ATAC-seq [Search on ENCODE]
GSM2285582 None T Lymphocyte None ATAC-seq [Search on ENCODE]
GSM2285580 None T Lymphocyte None ATAC-seq [Search on ENCODE]
GSM2285574 None T Lymphocyte None ATAC-seq [Search on ENCODE]
GSM2285573 None T Lymphocyte None ATAC-seq [Search on ENCODE]
GSM2365857 None T Lymphocyte Lung ATAC-seq [Search on ENCODE]
GSM2365856 None melanoma None ATAC-seq [Search on ENCODE]
GSM2365855 None melanoma None ATAC-seq [Search on ENCODE]
GSM2365854 None Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM2365853 None Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM2365851 None Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM2365850 None Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM2365849 None Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM2365848 None Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM2365847 None Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM2365846 None Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM2224597 LoVo None Colon DNase [Search on ENCODE]
GSM2863019 None T Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM2863018 None T Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM2863031 None T Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM2863030 None Th17 Blood ATAC-seq [Search on ENCODE]
GSM2705087 None Treg cell None ATAC-seq [Search on ENCODE]
GSM2705085 None Th17 None ATAC-seq [Search on ENCODE]
GSM2705084 None T Lymphocyte None ATAC-seq [Search on ENCODE]
GSM2705083 None T Lymphocyte None ATAC-seq [Search on ENCODE]
GSM2705088 None Treg cell None ATAC-seq [Search on ENCODE]
GSM2705076 None Th17 None ATAC-seq [Search on ENCODE]
GSM2863027 None Th2 Blood ATAC-seq [Search on ENCODE]
GSM2863021 None Th1 Blood ATAC-seq [Search on ENCODE]
GSM2863022 None Th1 Blood ATAC-seq [Search on ENCODE]
GSM2863023 None Th1 Blood ATAC-seq [Search on ENCODE]
GSM2705074 None Th17 None ATAC-seq [Search on ENCODE]
GSM2705068 None T Lymphocyte None ATAC-seq [Search on ENCODE]
GSM2702716 None B Lymphocyte None ATAC-seq [Search on ENCODE]
GSM2705066 None T Lymphocyte None ATAC-seq [Search on ENCODE]
Contents
Description
  • Overlapped Record Details
An overlapped record means a match between VIS and 1 of 3 Cistrome factor (histone modification, transcription factor binding site and chromatin accessibility), more specifically, this match includes at least 1 overlap between this VIS and 1 Cistrome factor-related sample from 1 of 3 Cistrome factor data. So one VIS may have several overlaps with multiple Cistrome factor-related samples, the associated factor and overlap amount of samples could indicate that the virus integration site is a potentially functional DNA element.