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HIV VIS-Cistrome Factor Overlapped Record Details

This pages show details of Cistrome factor-ralated samples which overlapped this VIS.
The cistrome refers to "the set of cis-acting targets of a trans-acting factor on a genome-wide scale."


Location chr1: 1318362-1318363 (GRCh38)
GSMID or ENCODE Cell line Cell type Tissue type Factor
GSM646441 K562 Erythroblast Bone Marrow H3K4me1 [Search on ENCODE]
GSM1203229 HKC8 Epithelium Kidney H3K27me3 [Search on ENCODE]
GSM1102783 None None Fetal Stomach H3K27ac [Search on ENCODE]
GSM669911 None Mesenchymal Stem Cell Bone Marrow H3K4me1 [Search on ENCODE]
GSM1112787 None Mesenchymal Stem Cell Bone Marrow H3K27ac [Search on ENCODE]
GSM1233900 GM12878 B Lymphocyte Blood H3K36me3 [Search on ENCODE]
GSM1233901 GM12878 B Lymphocyte Blood H3K36me3 [Search on ENCODE]
GSM1233923 GM12890 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1233942 GM12891 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1233964 GM12892 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1233965 GM12892 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1234067 GM19193 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1234086 GM19238 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1234108 GM19239 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1234109 GM19239 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1234188 GM2610 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1234206 GM2630 Lymphoblastoid Blood H3K36me3 [Search on ENCODE]
GSM1240113 HCT-116 None Colon H3K4me2 [Search on ENCODE]
GSM1003496 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
GSM733704 None Osteoblast Bone H3K4me1 [Search on ENCODE]
GSM1435530 GM2555 Fibroblast None H3K4me1 [Search on ENCODE]
GSM1526934 IMR90 Fibroblast Lung H3K4me2 [Search on ENCODE]
GSM1566556 KB Cell Epithelium HeLa contaminant H3K4me1 [Search on ENCODE]
GSM1663035 IOE11 Epithelium Ovary H3K27ac [Search on ENCODE]
GSM1820955 1015c None None H3K27ac [Search on ENCODE]
GSM1820958 TC-797 None None H3K27ac [Search on ENCODE]
GSM1819892 K562 Erythroblast Bone Marrow H3K9me3 [Search on ENCODE]
GSM1918449 K562 Erythroblast Bone Marrow H3K27ac [Search on ENCODE]
GSM1645724 None Keratinocyte None H3K27ac [Search on ENCODE]
GSM1645725 None Keratinocyte None H3K27ac [Search on ENCODE]
GSM1705251 None Embryonic Stem Cell Embryo H3K27ac [Search on ENCODE]
GSM1705252 None Embryonic Stem Cell Embryo H3K27ac [Search on ENCODE]
GSM1855991 MDA-MB-231 Epithelium Breast H3K27ac [Search on ENCODE]
GSM1855992 MDA-MB-231 Epithelium Breast H3K27ac [Search on ENCODE]
GSM1855995 MDA-MB-231 Epithelium Breast H3K27ac [Search on ENCODE]
GSM1902615 LNCaP Epithelium Prostate H3K27ac [Search on ENCODE]
ENCSR007YOT_1 None Fibroblast None H3K27ac [Search on ENCODE]
ENCSR007YOT_3 None Fibroblast None H3K27ac [Search on ENCODE]
ENCSR016PSC_1 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR016PSC_3 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR124YCC_1 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR124YCC_2 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR124YCC_3 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR210ZPC_1 None Smooth Muscle Cell None H3K27ac [Search on ENCODE]
ENCSR215DID_1 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR215DID_3 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR225AOO_3 A549 Epithelium Lung H3K4me1 [Search on ENCODE]
ENCSR410BCN_2 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR537FVU_3 A549 Epithelium Lung H3K4me1 [Search on ENCODE]
ENCSR555EAA_2 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR564IGJ_1 SK-N-SH Neuroblastoma cell Brain H3K27ac [Search on ENCODE]
ENCSR564IGJ_2 SK-N-SH Neuroblastoma cell Brain H3K27ac [Search on ENCODE]
ENCSR692JHM_1 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR692JHM_2 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR752UOD_4 MCF-7 Epithelium Breast H3K27ac [Search on ENCODE]
ENCSR766NHB_3 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR801IPH_1 None None gastrocnemius medialis H3K27ac [Search on ENCODE]
ENCSR801IPH_2 None None gastrocnemius medialis H3K27ac [Search on ENCODE]
ENCSR826UTD_2 PC-3 Epithelium Prostate H3K27ac [Search on ENCODE]
ENCSR834LCU_1 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR905REY_3 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
ENCSR906NGD_1 None Fibroblast None H3K4me1 [Search on ENCODE]
ENCSR918VQU_1 A549 Epithelium Lung H3K4me2 [Search on ENCODE]
GSM1975189 YCC-22 None Gastric Cancer Line H3K27ac [Search on ENCODE]
GSM1969634 YCC-22 None Gastric Cancer Line H3K27ac [Search on ENCODE]
GSM2080917 RWPE1 Epithelium Prostate H3K27ac [Search on ENCODE]
GSM2080913 C4-2B Epithelium Prostate H3K27ac [Search on ENCODE]
GSM2080914 C4-2B Epithelium Prostate H3K27ac [Search on ENCODE]
GSM2432975 D-341 Medulloblastoma Cerebellum H3K27ac [Search on ENCODE]
GSM2265672 HCT-116 None Colon H3K27ac [Search on ENCODE]
GSM2265671 HCT-116 None Colon H3K27ac [Search on ENCODE]
GSM2214081 7250 Fibroblast None H3K27ac [Search on ENCODE]
GSM1855989 MDA-MB-231 Epithelium Mammary Gland H3K4me1 [Search on ENCODE]
GSM1855986 MDA-MB-231 Epithelium Mammary Gland H3K4me1 [Search on ENCODE]
GSM1855985 MDA-MB-231 Epithelium Mammary Gland H3K4me1 [Search on ENCODE]
GSM1574292 CFPAC-1 None None H3K4me1 [Search on ENCODE]
GSM1574291 CFPAC-1 None None H3K4me1 [Search on ENCODE]
GSM1574290 CFPAC-1 None None H3K4me1 [Search on ENCODE]
GSM1574289 CFPAC-1 None None H3K4me1 [Search on ENCODE]
GSM1574245 CFPAC-1 None Pancreatic ductal H3K4me1 [Search on ENCODE]
GSM2058766 LNCaP Epithelium Prostate H3K4me2 [Search on ENCODE]
GSM2058760 LNCaP Epithelium Prostate H3K4me2 [Search on ENCODE]
GSM2058746 LNCaP Epithelium Prostate H3K4me2 [Search on ENCODE]
GSM2175578 HCT-116 Human colorectal tumor None H3K4me2 [Search on ENCODE]
GSM2175561 HCT-116 Human colorectal tumor None H3K4me2 [Search on ENCODE]
GSM2175544 HCT-116 Human colorectal tumor None H3K4me2 [Search on ENCODE]
GSM1835886 BT-16 None Brain H3K4me3 [Search on ENCODE]
GSM2058063 COLO 205 None None H3K4me1 [Search on ENCODE]
GSM2467348 HeLa Epithelium Cervix H3 [Search on ENCODE]
GSM2667961 HCT-116 None HCT116 H3K27ac [Search on ENCODE]
GSM2667960 HCT-116 None HCT116 H3K27ac [Search on ENCODE]
GSM772971 HUES64 Embryonic Stem Cell Embryo H3K4me1 [Search on ENCODE]
GSM2644048 D1 ORL UVA Hepatocyte None H3K4me1 [Search on ENCODE]
GSM2719877 TOV-21G None None H3K4me1 [Search on ENCODE]
GSM2712765 HCT-116 None HCT116 H3K4me1 [Search on ENCODE]
GSM2247241 None Keratinocyte None H3K27ac [Search on ENCODE]
GSM2711391 HCT-116 None HCT116 H3K4me2 [Search on ENCODE]
GSM2712769 HCT-116 None HCT116 H3K4me2 [Search on ENCODE]
GSM2301908 IMEC Epithelium Breast H3K4me1 [Search on ENCODE]
GSM2301909 IMEC Epithelium Breast H3K4me3 [Search on ENCODE]
GSM2301920 RPM-MC Epithelium None H3K27ac [Search on ENCODE]
GSM2723854 None Patient None H3K27ac [Search on ENCODE]
GSM2723855 None Patient None H3K4me1 [Search on ENCODE]
GSM2667958 HCT-116 None HCT116 H3K27ac [Search on ENCODE]
GSM2476343 SKmel147 melanoma None H3K4me1 [Search on ENCODE]
GSM2644050 D1 ORL UVA Hepatocyte None H3K27ac [Search on ENCODE]
GSM2644051 None Hepatocyte None H3K4me1 [Search on ENCODE]
GSM2644053 None Hepatocyte None H3K27ac [Search on ENCODE]
GSM2644054 None Hepatocyte None H3K4me1 [Search on ENCODE]
GSM2644056 None Hepatocyte None H3K27ac [Search on ENCODE]
GSM2550193 None Progenitor Cells None H3 [Search on ENCODE]
GSM2723838 A-498 None None H3K27ac [Search on ENCODE]
GSM2809622 HCT-116 None Colon H3K4me1 [Search on ENCODE]
GSM2301919 RPM-MC Epithelium None H3K4me3 [Search on ENCODE]
GSM2301915 IMEC Epithelium Breast H3K27ac [Search on ENCODE]
GSM2550254 None Fibroblast None H3K27ac [Search on ENCODE]
GSM2809621 HCT-116 None Colon H3K4me1 [Search on ENCODE]
GSM2571031 HCT-116 None HCT116 H3K27ac [Search on ENCODE]
GSM2571030 HCT-116 None HCT116 H3K27ac [Search on ENCODE]
Contents
Description
  • Overlapped Record Details
An overlapped record means a match between VIS and 1 of 3 Cistrome factor (histone modification, transcription factor binding site and chromatin accessibility), more specifically, this match includes at least 1 overlap between this VIS and 1 Cistrome factor-related sample from 1 of 3 Cistrome factor data. So one VIS may have several overlaps with multiple Cistrome factor-related samples, the associated factor and overlap amount of samples could indicate that the virus integration site is a potentially functional DNA element.